SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57716,_gap_,57716,57716 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Ochotona_princeps_76   (American pika)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Oikopleura_dioica 0
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Daphnia_pulex_   (Common water flea)   0
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 1
Tulasnella_calospora_AL13/4D_v1.0 0
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 1
Dictyostelium_discoideum 0
Brachypodium_distachyon_   (Stiff brome)   0
Trichomonas_vaginalis_ 0

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Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0

Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Ochotona_princeps_69   (American pika)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0

Others
Genome     Number
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 2
TargetDB__(Targets) 0
Uniprot_2018_03_genome 165
NCBI_2017_08_genome 8

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