SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,57716,_gap_,57716,_gap_,48508 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
48508 - Nuclear receptor ligand-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Crassostrea_gigas_22   (Pacific oyster)   1
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1

Strains
Genome     Number
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1

Longest transcript per gene
Genome     Number
Caenorhabditis_elegans_69_215   (Roundworm)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 180
NCBI_2017_08_genome 26

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]