Domain combinations for _gap_,57850,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
49899 - Concanavalin A-like lectins/glucanases

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Longest transcript per gene

Genome		Number
Homo_sapiens_69_37	(Human)	9
Pan_troglodytes_69_2.1.4	(Chimpanzee)	1
Gorilla_gorilla_69_3.1	(Western gorilla)	2
Pongo_abelii_69_2	(Sumatran orangutan)	1
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	2
Macaca_mulatta_69_1	(Rhesus monkey)	2
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	3
Otolemur_garnettii_69_3	(Small-eared galago)	1
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	1
Sus_scrofa_69_10.2	(Pig)	1
Vicugna_pacos_69_1	(Alpaca)	1
Tursiops_truncatus_69_1	(Bottlenose dolphin)	1
Mustela_putorius_furo_69_1.0	(Domestic ferret)	1
Equus_caballus_69_2	(Horse)	1
Pteropus_vampyrus_69_1	(Large flying fox)	1
Procavia_capensis_69_1	(Cape rock hyrax)	1
Echinops_telfairi_69	(Small Madagascar hedgehog)	1

Others

Genome		Number
Homo_sapiens_75_37_(old_version_GRC)	(Human)	17
Homo_sapiens__(NCBI_version)	(Human)	3
STRING_v9.0.5_(STRING)		13
NCBI_2017_08_genome		79
Uniprot_2018_03_genome		414

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