SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57850,_gap_,49879,49879,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
49879 - SMAD/FHA domain
49879 - SMAD/FHA domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1

Strains
Genome     Number
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 1

Others
Genome     Number
Protozoadb_2010_08_(Protozoadb) 9
NCBI_2017_08_genome 16
Uniprot_2018_03_genome 1062
STRING_v9.0.5_(STRING) 5

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