SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,57850,_gap_,52540,_gap_,48403,48452 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_mojavensis_1.3 1
Acyrthosiphon_pisum_   (Pea aphid)   1

Others
Genome     Number
NCBI_2017_08_genome 44
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 286

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]