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Home > SCOP hierarchy > Domain combination - _gap_,57997,_gap_,57903

Domain combinations for _gap_,57997,_gap_,57903 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57997 - Tropomyosin
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Gorilla_gorilla_76_3.1 (Western gorilla) 0

Papio_anubis_76 (Olive baboon) 0

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 0

Otolemur_garnettii_76_3 (Small-eared galago) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 0

Sus_scrofa_76_10.2 (Pig) 1

Vicugna_pacos_76_1 (Alpaca) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Loxodonta_africana_76_3 (African savanna elephant) 0

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 0

Anolis_carolinensis_76_2.0 (Green anole) 0

Latimeria_chalumnae_76_1 (Coelacanth) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Takifugu_rubripes_76_4 (Torafugu) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 0

Poecilia_formosa_76 (Amazon molly) 0

Oreochromis_niloticus_76_1.0 (Nile tilapia) 0

Danio_rerio_76_9 (Zebrafish) 1

Mnemiopsis_leidyi (Sea walnut) 0

Sphaeroforma_arctica_JP610_ 1

Plasmodium_falciparum_3D7_ 0

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Strains
Genome Number

Plasmodium_falciparum_Dd2_ 0

Longest transcript per gene
Genome Number

Gorilla_gorilla_69_3.1 (Western gorilla) 0

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 0

Otolemur_garnettii_69_3 (Small-eared galago) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 0

Sus_scrofa_69_10.2 (Pig) 1

Vicugna_pacos_69_1 (Alpaca) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Loxodonta_africana_69_3 (African savanna elephant) 0

Anolis_carolinensis_69_2.0 (Green anole) 0

Latimeria_chalumnae_69_1 (Coelacanth) 1

Takifugu_rubripes_69_4 (Torafugu) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 0

Oreochromis_niloticus_69_1.0 (Nile tilapia) 0

Danio_rerio_69_9 (Zebrafish) 1

Others
Genome Number

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 0

Protozoadb_2010_08_(Protozoadb) 0

STRING_v9.0.5_(STRING) 4

Uniprot_2018_03_genome 171

NCBI_2017_08_genome 43

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