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Home > SCOP hierarchy > Domain combination - _gap_,58069

Domain combinations for _gap_,58069 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

58069 - Virus ectodomain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 0

Gorilla_gorilla_76_3.1 (Western gorilla) 0

Pongo_abelii_76_2 (Sumatran orangutan) 0

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 0

Papio_anubis_76 (Olive baboon) 0

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 0

Rattus_norvegicus_76_5.0 (Norway rat) 0

Mus_musculus_76_38 (House mouse) 0

Oryctolagus_cuniculus_76_2 (Rabbit) 0

Sus_scrofa_76_10.2 (Pig) 3

Ovis_aries_76_3.1 (Sheep) 3

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Canis_familiaris_76_3.1 (Dog) 2

Felis_catus_76_6.2 (Domestic cat) 5

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 9

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 4

Meleagris_gallopavo_76_2 (Turkey) 0

Anas_platyrhynchos_76_1.0 (Mallard) 0

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 0

Anolis_carolinensis_76_2.0 (Green anole) 2

Lepisosteus_oculatus_76 (Spotted gar) 1

Takifugu_rubripes_76_4 (Torafugu) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 0

Poecilia_formosa_76 (Amazon molly) 0

Oreochromis_niloticus_76_1.0 (Nile tilapia) 0

Astyanax_mexicanus_76 (Mexican tetra) 0

Danio_rerio_76_9 (Zebrafish) 0

Mnemiopsis_leidyi (Sea walnut) 0

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 4

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 0

Gorilla_gorilla_69_3.1 (Western gorilla) 0

Pongo_abelii_69_2 (Sumatran orangutan) 0

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 0

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 0

Mus_musculus_69_38 (House mouse) 0

Sus_scrofa_69_10.2 (Pig) 3

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Canis_familiaris_69_3.1 (Dog) 2

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 4

Meleagris_gallopavo_69_2 (Turkey) 0

Gallus_gallus_69_2 (Chicken) 0

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 0

Anolis_carolinensis_69_2.0 (Green anole) 0

Takifugu_rubripes_69_4 (Torafugu) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 0

Oreochromis_niloticus_69_1.0 (Nile tilapia) 0

Danio_rerio_69_9 (Zebrafish) 0

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 0

Lotus_japonicus__(Early_assembly) 1

PDB_chains_(SCOP_1.75)_(PDB) 0

Protein_Data_Bank_(all_PDB_sequenc) 3

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6

NCBI_2017_08_genome 169

UniProt__viral_sequences_(Viral) 1447

Uniprot_2018_03_genome 9069

TargetDB__(Targets) 1

STRING_v9.0.5_(STRING) 3

NCBI_viral_sequences_(Viral) 0

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