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Domain combinations for _gap_,58069,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

58069 - Virus ectodomain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   8
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   3
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   3
Oryctolagus_cuniculus_76_2   (Rabbit)   2
Sus_scrofa_76_10.2   (Pig)   4
Ovis_aries_76_3.1   (Sheep)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Felis_catus_76_6.2   (Domestic cat)   3
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   18
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   12
Meleagris_gallopavo_76_2   (Turkey)   3
Anas_platyrhynchos_76_1.0   (Mallard)   3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Anolis_carolinensis_76_2.0   (Green anole)   16
Lepisosteus_oculatus_76   (Spotted gar)   2
Takifugu_rubripes_76_4   (Torafugu)   7
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   3
Poecilia_formosa_76   (Amazon molly)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   2
Danio_rerio_76_9   (Zebrafish)   2
Mnemiopsis_leidyi   (Sea walnut)   2

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   3
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Mus_musculus_69_38   (House mouse)   2
Sus_scrofa_69_10.2   (Pig)   3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   12
Meleagris_gallopavo_69_2   (Turkey)   3
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Anolis_carolinensis_69_2.0   (Green anole)   8
Takifugu_rubripes_69_4   (Torafugu)   7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   3
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   2

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   9
Homo_sapiens__(NCBI_version)   (Human)   7
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 21
NCBI_viral_sequences_(Viral) 29
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1
NCBI_2017_08_genome 619
UniProt__viral_sequences_(Viral) 1164
Uniprot_2018_03_genome 17980

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