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Domain combinations for _gap_,58113,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

58113 - Apolipoprotein A-I

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Canis_familiaris_76_3.1   (Dog)   0
Equus_caballus_76_2   (Horse)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Saccoglossus_kowalevskii_v3.0 4
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2
Adineta_vaga 3
Lottia_gigantea_   (Owl limpet)   2
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   1
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 1
Drosophila_suzukii 1
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_ananassae_1.3 0
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 2
Caenorhabditis_elegans_76_235   (Roundworm)   1
Mnemiopsis_leidyi   (Sea walnut)   1
Hydra_vulgaris 1
Amphimedon_queenslandica 2
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 2
Rhizomucor_miehei_CAU432_ 1
Ustilago_maydis_ 1
Microbotryum_violaceum_22 2
Coprinopsis_cinerea_okayama7_130_v3 1
Laccaria_bicolor_S238N-H82_ 1
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 3
Tremella_mesenterica_   (Witches' butter)   1
Daldinia_eschscholzii_EC12_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 3
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 1
Trichoderma_virens_Gv29-8_ 1
Botrytis_cinerea_B05.10_ 2
Sclerotinia_sclerotiorum_ 1
Leptosphaeria_maculans_22 1
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Mycosphaerella_graminicola_IPO323_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_versicolor_v1.0 0
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_oryzae_RIB40_ 2
Candida_tropicalis_MYA-3404_ 2
Candida_guilliermondii_ATCC_6260_ 1
Wickerhamomyces_anomalus 0
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 1
Lachancea_kluyveri_ 1
Ashbya_gossypii_ATCC_10895_ 0
Saccharomyces_paradoxus_MIT 0
Spizellomyces_punctatus_DAOM_BR117_ 2
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 1
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   3
Gossypium_raimondii_v221 4
Citrus_clementina_v165 1
Thellungiella_halophila_v173 2
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2
Capsella_rubella_v183 2
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   2
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   2
Manihot_esculenta_v147   (Cassava)   1
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   3
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   2
Triticum_aestivum_22   (Bread wheat)   3
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   2
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 7
Oryza_nivara_22 4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   3
Oryza_sativa_v193   (Rice)   3
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   2
Zea_mays_v181   (Maize)   2
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Physcomitrella_patens 2
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 0
Micromonas_pusilla_CCMP1545_v3.0 1
Ectocarpus_siliculosus 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_ultimum_v1.7-2 1
Pythium_irregulare_DAOM_BR486_22 2
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 0
Thalassiosira_pseudonana_CCMP1335 1
Ichthyophthirius_multifiliis_strain_G5_ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 1
Plasmodium_knowlesi_strain_H_ 2
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 2
Trichomonas_vaginalis_ 2
Guillardia_theta_CCMP2712_v1.0_ 1
Microcoleus_sp._PCC_7113 0
Trichodesmium_erythraeum_IMS101 1
Gloeocapsa_sp._PCC_7428 2
Halothece_sp._PCC_7418 1
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 1
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Saccharopolyspora_erythraea_NRRL_2338 1
Salinispora_tropica_CNB-440 1
Actinoplanes_sp._N902-109 1
Corynebacterium_kroppenstedtii_DSM_44385 1
Beutenbergia_cavernae_DSM_12333 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Jonesia_denitrificans_DSM_20603 1
Isoptericola_variabilis_225 1
[Cellvibrio]_gilvus_ATCC_13127 1
Bifidobacterium_dentium_Bd1 1
Bifidobacterium_adolescentis_ATCC_15703 2
Clostridium_clariflavum_DSM_19732 1
Eubacterium_siraeum 1
Butyrivibrio_proteoclasticus_B316 1
Clostridium_tetani_E88 1
Carboxydothermus_hydrogenoformans_Z-2901 1
Tetragenococcus_halophilus_NBRC_12172 1
Lactococcus_lactis_subsp._cremoris_MG1363 0
Streptococcus_equi_subsp._equi_4047 4
Streptococcus_pyogenes_str._Manfredo 2
Paenibacillus_mucilaginosus_3016 1
Bacillus_selenitireducens_MLS10 2
Parabacteroides_distasonis_ATCC_8503 1
Turneriella_parva_DSM_21527 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_murdochii_DSM_12563 0
Brachyspira_intermedia_PWS/A 0
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 0
Borrelia_bissettii_DN127 1
Borrelia_afzelii_PKo 1
Borrelia_recurrentis_A1 0
Borrelia_duttonii_Ly 0
Borrelia_crocidurae_str._Achema 0
Borrelia_turicatae_91E135 0
Borrelia_hermsii_DAH 0
Spirochaeta_smaragdinae_DSM_11293 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 0
Treponema_paraluiscuniculi_Cuniculi_A 1
Treponema_succinifaciens_DSM_2489 0
Treponema_pallidum_subsp._pallidum_SS14 2
Treponema_denticola_ATCC_35405 1
Spirochaeta_africana_DSM_8902 1
Spirochaeta_thermophila_DSM_6192 0
Desulfurispirillum_indicum_S5 1
Thermocrinis_albus_DSM_14484 1
Granulicella_mallensis_MP5ACTX8 1
Terriglobus_roseus_DSM_18391 1
Helicobacter_hepaticus_ATCC_51449 1
Nitratiruptor_sp._SB155-2 1
Desulfovibrio_magneticus_RS-1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Desulfovibrio_africanus_str._Walvis_Bay 1
Corallococcus_coralloides_DSM_2259 2
Dechlorosoma_suillum_PS 1
Thiomonas_arsenitoxydans 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_xenovorans_LB400 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Burkholderia_thailandensis_E264 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Verminephrobacter_eiseniae_EF01-2 1
Delftia_acidovorans_SPH-1 1
Polaromonas_naphthalenivorans_CJ2 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 1
Acidovorax_sp._JS42 1
Pusillimonas_sp._T7-7 1
Bordetella_petrii_DSM_12804 3
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans_A8 1
Magnetococcus_marinus_MC-1 1
Novosphingobium_sp._PP1Y 1
Hirschia_baltica_ATCC_49814 1
Rhodospirillum_centenum_SW 1
Polymorphum_gilvum_SL003B-26A1 0
Candidatus_Puniceispirillum_marinum_IMCC1322 1
Rickettsia_canadensis_str._McKiel 1
Starkeya_novella_DSM_506 0
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 0
Methylobacterium_populi_BJ001 0
Methylobacterium_nodulans_ORS_2060 0
Methylobacterium_radiotolerans_JCM_2831 0
Ochrobactrum_anthropi_ATCC_49188 1
Brucella_microti_CCM_4915 0
Brucella_pinnipedialis_B2/94 0
Brucella_canis_ATCC_23365 0
Brucella_suis_ATCC_23445 0
Brucella_melitensis_ATCC_23457 0
Brucella_ovis_ATCC_25840 0
Brucella_abortus_S19 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_medicae_WSM419 0
Sinorhizobium_meliloti_AK83 0
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 0
Rhizobium_etli_CIAT_652 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 0
Agrobacterium_vitis_S4 0
Candidatus_Liberibacter_asiaticus_str._psy62 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Mesorhizobium_loti_MAFF303099 0
Pelagibacterium_halotolerans_B2 0
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_sp._MC1 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_winogradskyi_Nb-255 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 0
Bartonella_tribocorum_CIP_105476 1
Bartonella_clarridgeiae_73 1
Bartonella_henselae_str._Houston-1 0
Bartonella_quintana_str._Toulouse 0
Bartonella_bacilliformis_KC583 0
Methylomicrobium_alcaliphilum 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Xenorhabdus_bovienii_SS-2004 1
Xenorhabdus_nematophila_ATCC_19061 1
Moraxella_catarrhalis_RH4 1
Cenarchaeum_symbiosum_A 1
Hyperthermus_butylicus_DSM_5456 1
Staphylothermus_marinus_F1 1
Methanocella_arvoryzae_MRE50 0
Methanocella_paludicola_SANAE 1
Haloterrigena_turkmenica_DSM_5511 1

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Strains
Genome     Number
Aspergillus_fumigatus_A1163_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2
Trypanosoma_brucei_Lister_427_v4.1 0
Plasmodium_falciparum_Dd2_ 1
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_elongatus_PCC_6301 1
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_acuminata_PCC_6304 1
Cyanothece_sp._PCC_7425 0
Cyanobacterium_stanieri_PCC_7202 1
Cylindrospermum_stagnale_PCC_7417 1
Nocardiopsis_alba_ATCC_BAA-2165 2
Streptomyces_davawensis_JCM_4913 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Amycolatopsis_orientalis_HCCB10007 1
Tropheryma_whipplei_str._Twist 1
Clavibacter_michiganensis_subsp._sepedonicus 1
Eubacterium_siraeum_V10Sc8a 1
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_botulinum_BKT015925 0
Clostridium_botulinum_A_str._ATCC_19397 0
Lactobacillus_salivarius_UCC118 0
Lactococcus_lactis_subsp._cremoris_NZ9000 0
Lactococcus_lactis_subsp._cremoris_SK11 0
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_pyogenes_HSC5 2
Streptococcus_pyogenes_A20 1
Streptococcus_pyogenes_MGAS1882 1
Streptococcus_pyogenes_Alab49 2
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pyogenes_MGAS10270 3
Streptococcus_pyogenes_MGAS2096 3
Streptococcus_pyogenes_MGAS9429 2
Streptococcus_pyogenes_MGAS6180 3
Streptococcus_pyogenes_MGAS8232 4
Streptococcus_pyogenes_MGAS10394 5
Streptococcus_pyogenes_MGAS315 3
Streptococcus_pyogenes_SSI-1 2
Streptococcus_pyogenes_M1_476 1
Streptococcus_pyogenes_MGAS5005 1
Streptococcus_pyogenes_M1_GAS 2
Streptococcus_pneumoniae_A026 1
Streptococcus_pneumoniae_ST556 1
Streptococcus_pneumoniae_TCH8431/19A 1
Streptococcus_agalactiae_ILRI005 1
Paenibacillus_mucilaginosus_K02 1
Bacillus_amyloliquefaciens_IT-45 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1
Bacillus_cereus_B4264 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Borrelia_garinii_BgVir 1
Borrelia_afzelii_HLJ01 1
Borrelia_afzelii_PKo 1
Borrelia_burgdorferi_ZS7 0
Borrelia_miyamotoi_LB-2001 1
Treponema_pedis_str._T_A4 1
Treponema_pallidum_str._Fribourg-Blanc 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1
Treponema_pallidum_subsp._pallidum_DAL-1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1
Spirochaeta_thermophila_DSM_6578 0
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Burkholderia_sp._CCGE1001 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Variovorax_paradoxus_EPS 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1
Methylobacterium_extorquens_PA1 0
Brucella_ceti_TE10759-12 0
Brucella_ceti_TE28753-12 0
Brucella_canis_HSK_A52141 0
Brucella_suis_VBI22 0
Brucella_suis_1330 0
Brucella_suis_1330 0
Brucella_melitensis_NI 0
Brucella_melitensis_M5-90 0
Brucella_melitensis_M28 0
Brucella_melitensis_bv._1_str._16M 0
Brucella_abortus_A13334 0
Brucella_melitensis_biovar_Abortus_2308 0
Brucella_abortus_bv._1_str._9-941 0
Sinorhizobium_fredii_USDA_257 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_2011 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_tropici_CIAT_899 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Liberibacter_crescens_BT-1 1
Candidatus_Liberibacter_americanus_str._Sao_Paulo 1
Candidatus_Liberibacter_asiaticus_str._gxpsy 1
Mesorhizobium_australicum_WSM2073 1
Hyphomicrobium_nitrativorans_NL23 0
Hyphomicrobium_denitrificans_1NES1 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bartonella_australis_Aust/NH1 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 0
Bartonella_quintana_RM-11 1
Alcanivorax_dieselolei_B5 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Serratia_plymuthica_S13 1
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_AJ13355 1
Pseudomonas_putida_HB3267 1
Pseudomonas_mendocina_NK-01 1

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Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Canis_familiaris_69_3.1   (Dog)   0
Equus_caballus_69_2   (Horse)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Meleagris_gallopavo_69_2   (Turkey)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   2

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Others
Genome     Number
Encephalitozoon_cuniculi_(endoparasite) 1
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
NCBI_plasmid_sequences_(Plasmids) 8
NCBI_2017_08_genome 5358
TargetDB__(Targets) 3
UniProt__viral_sequences_(Viral) 3
NCBI_viral_sequences_(Viral) 9
Protozoadb_2010_08_(Protozoadb) 19
STRING_v9.0.5_(STRING) 169
Uniprot_2018_03_genome 11610

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