SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,63501,57424,57424,57424,_gap_,63501 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

63501 - Frizzled cysteine-rich domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
57424 - LDL receptor-like module
63501 - Frizzled cysteine-rich domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Mus_musculus_76_38   (House mouse)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   1
Sorex_araneus_76_1   (European shrew)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0

Longest transcript per gene
Genome     Number
Canis_familiaris_69_3.1   (Dog)   0
Sorex_araneus_69_1   (European shrew)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Uniprot_2018_03_genome 44
NCBI_2017_08_genome 0
STRING_v9.0.5_(STRING) 0

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