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Domain combinations for _gap_,63825,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

63825 - YWTD domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 0
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 4
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   1
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 1
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 1
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 1
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3
Anopheles_darlingi_22   (American malaria mosquito)   2
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   4
Strigamia_maritima_22 1
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   0
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   0
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   2
Hydra_vulgaris 0
Amphimedon_queenslandica 0
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 19
Mortierella_verticillata_NRRL_6337_ 1
Ustilago_maydis_ 2
Galerina_marginata_v1.0 2
Fomitiporia_mediterranea_v1.0 1
Podospora_anserina_ 1
Trichoderma_virens_Gv29-8_ 1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Pyrenophora_teres_f._teres_22 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_rubrum_CBS_118892_ 1
Aspergillus_nidulans_FGSC_A4_ 1
Dictyostelium_discoideum 1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 2
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 3
Arabidopsis_lyrata_   (Lyrate rockcress)   2
Arabidopsis_thaliana_10   (Thale cress)   1
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   3
Glycine_max_v109   (Soybean)   1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   1
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   1
Populus_trichocarpa_v156   (Black cottonwood)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 1
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   2
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 2
Oryza_nivara_22 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   4
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Musa_balbisiana   (Balbis banana)   1
Amborella_trichopoda_22 1
Ostreococcus_lucimarinus_CCE9901_ 0
Bathycoccus_prasinos_ 0
Porphyridium_purpureum_02_2012 3
Bigelowiella_natans_CCMP2755_22 1
Cyanophora_paradoxa_ 4
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 2
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_congolense_2.4 2
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 7
Ectocarpus_siliculosus 2
Aureococcus_anophagefferens_ 5
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phaeodactylum_tricornutumCCAP_1055/1 2
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 2
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 3
Naegleria_gruberi_ 7
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 5
Leptolyngbya_sp._PCC_7376 2
Acaryochloris_marina_MBIC11017 1
Synechococcus_sp._PCC_6312 1
Trichodesmium_erythraeum_IMS101 2
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 0
Nostoc_sp._PCC_7107 2
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 0
Eggerthella_lenta_DSM_2243 1
Ilumatobacter_coccineus 1
Acidimicrobium_ferrooxidans_DSM_10331 1
Nakamurella_multipartita_DSM_44233 0
Catenulispora_acidiphila_DSM_44928 0
Kitasatospora_setae_KM-6054 0
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 1
Amycolatopsis_mediterranei_U32 2
Kribbella_flavida_DSM_17836 0
Actinoplanes_sp._SE50/110 0
Rhodococcus_equi_103S 1
Mycobacterium_smegmatis_str._MC2_155 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 0
Intrasporangium_calvum_DSM_43043 1
Cellulomonas_flavigena_DSM_20109 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 2
Chloroflexus_aurantiacus_J-10-fl 2
Desulfosporosinus_acidiphilus_SJ4 1
Desulfotomaculum_acetoxidans_DSM_771 1
Clostridium_novyi_NT 1
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 1
Clostridium_botulinum_A_str._ATCC_3502 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_kefiranofaciens_ZW3 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1
Pediococcus_claussenii_ATCC_BAA-344 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_mucilaginosus_3016 1
Geobacillus_kaustophilus_HTA426 1
Geobacillus_sp._GHH01 1
Gemmatimonas_aurantiaca_T-27 1
Ignavibacterium_album_JCM_16511 1
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 1
Salinibacter_ruber_M8 0
Cyclobacterium_marinum_DSM_745 1
Fibrella_aestuarina 0
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 2
Odoribacter_splanchnicus_DSM_20712 1
Prevotella_intermedia_17 1
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_fragilis_YCH46 2
Pedobacter_saltans_DSM_12145 2
Pedobacter_heparinus_DSM_2366 1
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 0
Lacinutrix_sp._5H-3-7-4 1
Croceibacter_atlanticus_HTCC2559 4
Aequorivita_sublithincola_DSM_14238 3
Flavobacteriaceae_bacterium_3519-10 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Weeksella_virosa_DSM_16922 1
Flavobacterium_johnsoniae_UW101 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Isosphaera_pallida_ATCC_43644 0
Rhodopirellula_baltica_SH_1 1
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 0
Turneriella_parva_DSM_21527 2
Treponema_azotonutricium_ZAS-9 1
Treponema_brennaborense_DSM_12168 0
Treponema_paraluiscuniculi_Cuniculi_A 1
Treponema_pallidum_subsp._pallidum_SS14 2
Spirochaeta_africana_DSM_8902 1
Thermotoga_lettingae_TMO 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 1
Granulicella_mallensis_MP5ACTX8 1
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 2
Leptospirillum_ferrooxidans_C2-3 1
Bacteriovorax_marinus_SJ 1
Nitratifractor_salsuginis_DSM_16511 0
Desulfomonile_tiedjei_DSM_6799 2
Geobacter_uraniireducens_Rf4 1
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 6
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 2
Corallococcus_coralloides_DSM_2259 4
Myxococcus_xanthus_DK_1622 2
Myxococcus_fulvus_HW-1 2
Rubrivivax_gelatinosus_IL144 1
Burkholderia_xenovorans_LB400 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Delftia_acidovorans_SPH-1 2
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_sp._Is79A3 1
Magnetococcus_marinus_MC-1 0
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 0
Caulobacter_segnis_ATCC_21756 1
Dinoroseobacter_shibae_DFL_12 1
Polymorphum_gilvum_SL003B-26A1 1
Parvibaculum_lavamentivorans_DS-1 1
Mesorhizobium_sp._BNC1 0
Saccharophagus_degradans_2-40 2
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 0
Vibrio_harveyi_ATCC_BAA-1116 1
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 1
Shewanella_woodyi_ATCC_51908 1
Shewanella_violacea_DSS12 1
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Kangiella_koreensis_DSM_16069 0
Marinomonas_mediterranea_MMB-1 1
Legionella_longbeachae_NSW150 1
Cenarchaeum_symbiosum_A 0
Methanosarcina_barkeri_str._Fusaro 0
Methanoplanus_petrolearius_DSM_11571 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   2
Trypanosoma_brucei_Lister_427_v4.1 6
Chamaesiphon_minutus_PCC_6605 0
Synechococcus_sp._CC9605 0
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 1
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_8801 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Cylindrospermum_stagnale_PCC_7417 1
Frankia_sp._EuI1c 1
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_collinus_Tu_365 1
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Mycobacterium_smegmatis_str._MC2_155 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 0
Actinomyces_viscosus_C505 0
Thermus_thermophilus_SG0.5JP17-16 1
Desulfosporosinus_meridiei_DSM_13257 1
Desulfotomaculum_gibsoniae_DSM_7213 0
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_kluyveri_NBRC_12016 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_helveticus_R0052 1
Lactobacillus_helveticus_CNRZ32 1
Lactobacillus_acidophilus_La-14 1
Lactobacillus_acidophilus_NCFM 1
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Salinibacter_ruber_DSM_13855 0
Rhodothermus_marinus_SG0.5JP17-172 1
Bacteroides_fragilis_638R 2
Bacteroides_fragilis_NCTC_9343 2
Riemerella_anatipestifer_RA-CH-2 1
Riemerella_anatipestifer_RA-GD 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 0
Treponema_pallidum_str._Fribourg-Blanc 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1
Treponema_pallidum_subsp._pallidum_DAL-1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1
Desulfocapsa_sulfexigens_DSM_10523 2
Sorangium_cellulosum_So0157-2 3
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 3
Burkholderia_pseudomallei_1026b 1
Burkholderia_lata 1
Paracoccus_aminophilus_JCM_7686 1
Candidatus_Pelagibacter_ubique_HTCC1062 0
Sinorhizobium_fredii_USDA_257 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 0
Thalassolituus_oleivorans_MIL-1 2
Pseudomonas_putida_HB3267 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Malus_x_domestica_(Duplicate)   (Apple)   1
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 7
Protozoadb_2010_08_(Protozoadb) 13
UniProt__viral_sequences_(Viral) 1
Protein_Data_Bank_(all_PDB_sequenc) 6
STRING_v9.0.5_(STRING) 110
NCBI_viral_sequences_(Viral) 2
Uniprot_2018_03_genome 14180
TargetDB__(Targets) 4
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6
NCBI_2017_08_genome 3829

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