Domain combinations for _gap_,64593,64593,_gap_,64593,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

64593 - Intermediate filament protein, coiled coil region
64593 - Intermediate filament protein, coiled coil region
64593 - Intermediate filament protein, coiled coil region

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

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Strains

Genome		Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)	(Tropical clawed frog)	11

Longest transcript per gene

Genome		Number
Homo_sapiens_69_37	(Human)	18
Pan_troglodytes_69_2.1.4	(Chimpanzee)	15
Gorilla_gorilla_69_3.1	(Western gorilla)	12
Pongo_abelii_69_2	(Sumatran orangutan)	11
Nomascus_leucogenys_69_1.0	(Northern white-cheeked gibbon)	13
Macaca_mulatta_69_1	(Rhesus monkey)	16
Callithrix_jacchus_69_3.2.1	(White-tufted-ear marmoset)	37
Otolemur_garnettii_69_3	(Small-eared galago)	11
Microcebus_murinus_69_1	(Gray mouse lemur)	11
Rattus_norvegicus_69_3.4	(Norway rat)	9
Mus_musculus_69_38	(House mouse)	18
Dipodomys_ordii_69_1	(Ord's kangaroo rat)	6
Ictidomys_tridecemlineatus_69_2	(Thirteen-lined ground squirrel)	12
Cavia_porcellus_69_3	(Domestic guinea pig)	4
Oryctolagus_cuniculus_69_2	(Rabbit)	7
Ochotona_princeps_69	(American pika)	11
Tupaia_belangeri_69	(Northern tree shrew)	6
Sus_scrofa_69_10.2	(Pig)	12
Bos_taurus_69_3.1	(Cattle)	21
Vicugna_pacos_69_1	(Alpaca)	1
Tursiops_truncatus_69_1	(Bottlenose dolphin)	4
Mustela_putorius_furo_69_1.0	(Domestic ferret)	10
Ailuropoda_melanoleuca_69_1	(Giant panda)	13
Canis_familiaris_69_3.1	(Dog)	13
Felis_catus_69	(Domestic cat)	8
Equus_caballus_69_2	(Horse)	18
Myotis_lucifugus_69_2.0	(Little brown bat)	18
Pteropus_vampyrus_69_1	(Large flying fox)	13
Sorex_araneus_69_1	(European shrew)	2
Erinaceus_europaeus_69	(Western European hedgehog)	8
Procavia_capensis_69_1	(Cape rock hyrax)	9
Loxodonta_africana_69_3	(African savanna elephant)	11
Echinops_telfairi_69	(Small Madagascar hedgehog)	8
Dasypus_novemcinctus_69_2	(Nine-banded armadillo)	4
Macropus_eugenii_69_1.0	(Tammar wallaby)	8
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	11
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	8
Ornithorhynchus_anatinus_69_5	(Platypus)	8
Meleagris_gallopavo_69_2	(Turkey)	3
Gallus_gallus_69_2	(Chicken)	3
Taeniopygia_guttata_69_3.2.4	(Zebra finch)	1
Anolis_carolinensis_69_2.0	(Green anole)	6
Xenopus_tropicalis_69_4.2	(Tropical clawed frog)	3
Latimeria_chalumnae_69_1	(Coelacanth)	3
Gadus_morhua_69_1	(Atlantic cod)	2
Takifugu_rubripes_69_4	(Torafugu)	2
Gasterosteus_aculeatus_69_1	(Three-spined stickleback)	3
Oryzias_latipes_69_1	(Japanese medaka)	3
Xiphophorus_maculatus_69_4.4.2	(Southern platyfish)	4
Oreochromis_niloticus_69_1.0	(Nile tilapia)	2
Danio_rerio_69_9	(Zebrafish)	2

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Others

Genome		Number
Homo_sapiens_75_37_(old_version_GRC)	(Human)	23
Homo_sapiens__(NCBI_version)	(Human)	19
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)	(House mouse)	18
STRING_v9.0.5_(STRING)		202
Uniprot_2018_03_genome		22020
NCBI_2017_08_genome		2631
TargetDB__(Targets)		4

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