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Home > SCOP hierarchy > Domain combination - _gap_,64593,90257,_gap_,64593,_gap_

Domain combinations for _gap_,64593,90257,_gap_,64593,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

64593 - Intermediate filament protein, coiled coil region
90257 - Myosin rod fragments
64593 - Intermediate filament protein, coiled coil region

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 2

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_76_3.1 (Western gorilla) 3

Pongo_abelii_76_2 (Sumatran orangutan) 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 3

Macaca_mulatta_76_1 (Rhesus monkey) 2

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_76_3 (Small-eared galago) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 2

Sus_scrofa_76_10.2 (Pig) 2

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 2

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 2

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 3

Petromyzon_marinus_76_7.0 (Sea lamprey) 1

Xenopus_laevis_ (African clawed frog) 8

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 3

Latimeria_chalumnae_76_1 (Coelacanth) 2

Lepisosteus_oculatus_76 (Spotted gar) 4

Gadus_morhua_76_1 (Atlantic cod) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 3

Takifugu_rubripes_76_4 (Torafugu) 6

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 3

Oryzias_latipes_76_1 (Japanese medaka) 2

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 2

Astyanax_mexicanus_76 (Mexican tetra) 2

Danio_rerio_76_9 (Zebrafish) 4

Octopus_bimaculoides_280 1

Crassostrea_gigas_22 (Pacific oyster) 0

Helobdella_robusta_ 0

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 5

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Pongo_abelii_69_2 (Sumatran orangutan) 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Macaca_mulatta_69_1 (Rhesus monkey) 2

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Otolemur_garnettii_69_3 (Small-eared galago) 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 2

Sus_scrofa_69_10.2 (Pig) 2

Bos_taurus_69_3.1 (Cattle) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Canis_familiaris_69_3.1 (Dog) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 2

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 3

Petromyzon_marinus_69_7.0 (Sea lamprey) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_69_1 (Coelacanth) 2

Gadus_morhua_69_1 (Atlantic cod) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 3

Takifugu_rubripes_69_4 (Torafugu) 4

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 2

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 2

Danio_rerio_69_9 (Zebrafish) 3

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 2

Homo_sapiens__(NCBI_version) (Human) 2

STRING_v9.0.5_(STRING) 36

Uniprot_2018_03_genome 2822

NCBI_2017_08_genome 270

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Domain combinations for _gap_,64593,90257,_gap_,64593,_gap_ superfamilies in groups of genomes