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Domain combinations for _gap_,68912 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

68912 - Rho N-terminal domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tribolium_castaneum_3.0   (Red flour beetle)   0
Selaginella_moellendorffii_ 1
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 1
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   1
Thellungiella_halophila_v173 1
Capsella_rubella_v183 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   2
Carica_papaya_   (Papaya)   1
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   1
Manihot_esculenta_v147   (Cassava)   3
Vitis_vinifera_   (Wine grape)   1
Solanum_lycopersicum_v.2.3   (Tomato)   2
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 1
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   2
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   1
Oryza_glumaepatula_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Musa_balbisiana   (Balbis banana)   1
Amborella_trichopoda_22 1
Chlorella_variabilis_sp._NC64A_ 1
Thermobaculum_terrenum_ATCC_BAA-798 0
Synechococcus_sp._PCC_6312 0
Synechococcus_elongatus_PCC_7942 0
Candidatus_Phytoplasma_mali 0
Aster_yellows_witches'-broom_phytoplasma_AYWB 0
Onion_yellows_phytoplasma_OY-M 0
Mycoplasma_pulmonis_UAB_CTIP 1
Mycoplasma_hyopneumoniae_168 1
Ilumatobacter_coccineus 2
Acidothermus_cellulolyticus_11B 0
Frankia_symbiont_of_Datisca_glomerata 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 0
Actinoplanes_sp._SE50/110 0
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 1
Rhodococcus_jostii_RHA1 2
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 1
Rhodococcus_erythropolis_PR4 1
Nocardia_farcinica_IFM_10152 0
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 0
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 0
Mycobacterium_leprae_Br4923 0
Sanguibacter_keddieii_DSM_10542 1
Jonesia_denitrificans_DSM_20603 1
Isoptericola_variabilis_225 1
Cellulomonas_flavigena_DSM_20109 1
Arthrobacter_arilaitensis_Re117 1
Truepera_radiovictrix_DSM_17093 0
Thermaerobacter_marianensis_DSM_12885 0
Sulfobacillus_acidophilus_DSM_10332 0
Desulfitobacterium_hafniense_Y51 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 2
Streptococcus_infantarius_subsp._infantarius_CJ18 1
Bacillus_sp._1NLA3E 1
Staphylococcus_haemolyticus_JCSC1435 1
Staphylococcus_aureus_subsp._aureus_JH1 1
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 1
Gramella_forsetii_KT0803 1
Maribacter_sp._HTCC2170 0
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 1
Muricauda_ruestringensis_DSM_13258 0
Waddlia_chondrophila_WSU_86-1044 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 0
Simkania_negevensis_Z 0
Chlamydophila_pecorum_E58 0
Chlamydophila_pneumoniae_TW-183 0
Chlamydophila_caviae_GPIC 0
Chlamydophila_felis_Fe/C-56 0
Chlamydophila_abortus_S26/3 0
Chlamydia_psittaci_01DC11 0
Chlamydia_trachomatis_B/Jali20/OT 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 1
Pirellula_staleyi_DSM_6068 0
Methylacidiphilum_infernorum_V4 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Fretibacterium_fastidiosum 0
Thermovirga_lienii_DSM_17291 0
Thermanaerovibrio_acidaminovorans_DSM_6589 0
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Brachyspira_intermedia_PWS/A 0
Brachyspira_hyodysenteriae_WA1 0
Spirochaeta_smaragdinae_DSM_11293 0
Spirochaeta_caldaria_DSM_7334 0
Treponema_azotonutricium_ZAS-9 0
Treponema_brennaborense_DSM_12168 0
Treponema_succinifaciens_DSM_2489 0
Treponema_denticola_ATCC_35405 0
Spirochaeta_africana_DSM_8902 0
Thermodesulfatator_indicus_DSM_15286 0
Mesotoga_prima_MesG1.Ag.4.2 0
Kosmotoga_olearia_TBF_19.5.1 0
Elusimicrobium_minutum_Pei191 0
Acidithiobacillus_ferrivorans_SS3 0
Acidithiobacillus_caldus_SM-1 0
Bdellovibrio_bacteriovorus_HD100 0
Sulfurospirillum_barnesii_SES-3 0
Sulfurimonas_autotrophica_DSM_16294 0
Wolinella_succinogenes_DSM_1740 0
Nitratiruptor_sp._SB155-2 0
Desulfarculus_baarsii_DSM_2075 0
Desulfovibrio_piezophilus 0
Desulfovibrio_alaskensis_G20 0
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 0
Haliangium_ochraceum_DSM_14365 1
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Thauera_sp._MZ1T 0
Azoarcus_sp._BH72 0
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 0
Brevundimonas_subvibrioides_ATCC_15264 0
Caulobacter_sp._K31 0
Caulobacter_segnis_ATCC_21756 0
Phenylobacterium_zucineum_HLK1 0
Phaeobacter_gallaeciensis_2.10 1
Rhodospirillum_photometricum_DSM_122 0
Azospirillum_sp._B510 0
Candidatus_Midichloria_mitochondrii_IricVA 0
Neorickettsia_risticii_str._Illinois 0
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 0
Wolbachia_sp._wRi 0
Ehrlichia_canis_str._Jake 0
Ehrlichia_ruminantium_str._Gardel 0
Anaplasma_marginale_str._Florida 0
Anaplasma_centrale_str._Israel 0
Orientia_tsutsugamushi_str._Boryong 0
Rickettsia_massiliae_MTU5 0
Photobacterium_profundum_SS9 0
Idiomarina_loihiensis_L2TR 1
Marinobacter_adhaerens_HP15 1
Alteromonas_macleodii_str._'Deep_ecotype' 1
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 0
Pseudoxanthomonas_suwonensis_11-1 0
Xylella_fastidiosa_M23 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 0
Xanthomonas_campestris_pv._campestris_str._B100 0
Providencia_stuartii_MRSN_2154 1
Serratia_sp._ATCC_39006 0
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Methylophaga_sp._JAM1 1
Acholeplasma_laidlawii_PG-8A 0

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Strains
Genome     Number
Hordeum_vulgare_22   (Domesticated barley)   3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 0
Candidatus_Phytoplasma_australiense 0
Mycoplasma_hyopneumoniae_168-L 1
Mycoplasma_hyopneumoniae_7422 1
Mycoplasma_hyopneumoniae_232 1
Mycoplasma_hyopneumoniae_7448 1
Mycoplasma_hyopneumoniae_J 1
Frankia_sp._EuI1c 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_collinus_Tu_365 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 1
Mycobacterium_sp._JDM601 0
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_sp._KMS 0
Mycobacterium_sp._MCS 0
Mycobacterium_gilvum_Spyr1 0
Mycobacterium_leprae_TN 0
Corynebacterium_maris_DSM_45190 1
Sulfobacillus_acidophilus_TPY 0
Streptococcus_pyogenes_A20 1
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pyogenes_MGAS10270 1
Streptococcus_pyogenes_MGAS315 1
Streptococcus_pyogenes_SSI-1 1
Streptococcus_pyogenes_MGAS5005 1
Streptococcus_agalactiae_ILRI005 1
Streptococcus_suis_T15 1
Staphylococcus_aureus_Bmb9393 1
Staphylococcus_aureus_subsp._aureus_Z172 1
Staphylococcus_aureus_subsp._aureus_TW20 1
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1
Staphylococcus_aureus_subsp._aureus_JH9 1
Nonlabens_dokdonensis_DSW-6 1
Chlamydia_pecorum_P787 0
Chlamydia_pecorum_W73 0
Chlamydia_pecorum_PV3056/3 0
Chlamydophila_pneumoniae_LPCoLN 0
Chlamydophila_pneumoniae_J138 0
Chlamydophila_pneumoniae_CWL029 0
Chlamydophila_pneumoniae_AR39 0
Chlamydia_psittaci_01DC12 0
Chlamydia_psittaci_WC 0
Chlamydia_psittaci_M56 0
Chlamydia_psittaci_WS/RT/E30 0
Chlamydia_psittaci_VS225 0
Chlamydia_psittaci_MN 0
Chlamydia_psittaci_GR9 0
Chlamydia_psittaci_84/55 0
Chlamydia_psittaci_08DC60 0
Chlamydia_psittaci_02DC15 0
Chlamydia_psittaci_C19/98 0
Chlamydia_psittaci_NJ1 0
Chlamydia_psittaci_CP3 0
Chlamydophila_psittaci_RD1 0
Chlamydia_psittaci_Mat116 0
Chlamydophila_psittaci_6BC 0
Chlamydophila_psittaci_6BC 0
Chlamydia_trachomatis_C/TW-3 0
Chlamydia_trachomatis_L2/434/Bu(f) 0
Chlamydia_trachomatis_L2/434/Bu(i) 0
Chlamydia_trachomatis_IU888 0
Chlamydia_trachomatis_IU824 0
Chlamydia_trachomatis_L2b/Canada2 0
Chlamydia_trachomatis_L2b/Canada1 0
Chlamydia_trachomatis_L3/404/LN 0
Chlamydia_trachomatis_L2b/Ams5 0
Chlamydia_trachomatis_L2b/Ams4 0
Chlamydia_trachomatis_L2b/Ams3 0
Chlamydia_trachomatis_L2b/Ams2 0
Chlamydia_trachomatis_L2b/Ams1 0
Chlamydia_trachomatis_L2b/795 0
Chlamydia_trachomatis_L2b/CV204 0
Chlamydia_trachomatis_L2b/LST 0
Chlamydia_trachomatis_L2b/UCH-2 0
Chlamydia_trachomatis_L2b/8200/07 0
Chlamydia_trachomatis_L2/25667R 0
Chlamydia_trachomatis_L1/224 0
Chlamydia_trachomatis_L1/115 0
Chlamydia_trachomatis_L1/440/LN 0
Chlamydia_trachomatis_K/SotonK1 0
Chlamydia_trachomatis_Ia/SotonIa3 0
Chlamydia_trachomatis_Ia/SotonIa1 0
Chlamydia_trachomatis_G/SotonG1 0
Chlamydia_trachomatis_F/SotonF3 0
Chlamydia_trachomatis_F/SW5 0
Chlamydia_trachomatis_F/SW4 0
Chlamydia_trachomatis_E/SotonE8 0
Chlamydia_trachomatis_E/SotonE4 0
Chlamydia_trachomatis_E/SW3 0
Chlamydia_trachomatis_D/SotonD6 0
Chlamydia_trachomatis_D/SotonD5 0
Chlamydia_trachomatis_D/SotonD1 0
Chlamydia_trachomatis_A/5291 0
Chlamydia_trachomatis_A/363 0
Chlamydia_trachomatis_RC-J/971 0
Chlamydia_trachomatis_RC-L2/55 0
Chlamydia_trachomatis_J/6276tet1 0
Chlamydia_trachomatis_RC-J/966 0
Chlamydia_trachomatis_RC-J(s)/122 0
Chlamydia_trachomatis_RC-F(s)/342 0
Chlamydia_trachomatis_RC-L2(s)/3 0
Chlamydia_trachomatis_RC-J/953 0
Chlamydia_trachomatis_RC-J943 0
Chlamydia_trachomatis_RC-Fs852 0
Chlamydia_trachomatis_RC-L2s46 0
Chlamydia_trachomatis_RC-F69 0
Chlamydia_trachomatis_L2c 0
Chlamydia_trachomatis_D-LC 0
Chlamydia_trachomatis_D-EC 0
Chlamydia_trachomatis_G/9301 0
Chlamydia_trachomatis_G/11074 0
Chlamydia_trachomatis_G/11222 0
Chlamydia_trachomatis_G/9768 0
Chlamydia_trachomatis_E/150 0
Chlamydia_trachomatis_E/11023 0
Chlamydia_trachomatis_B/TZ1A828/OT 0
Chlamydia_trachomatis_Sweden2 0
Chlamydia_trachomatis_E/Bour 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_L2b/UCH-1/proctitis 0
Chlamydia_trachomatis_434/Bu 0
Chlamydia_trachomatis_A/HAR-13 0
Chlamydia_trachomatis_D/UW-3/CX 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 0
Treponema_pedis_str._T_A4 0
Bdellovibrio_exovorus_JSS 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 0
Desulfovibrio_desulfuricans_ND132 0
Myxococcus_stipitatus_DSM_14675 0
Pandoraea_pnomenusa_3kgm 1
Ralstonia_solanacearum_CMR15 1
Caulobacter_crescentus_CB15 0
Phaeobacter_gallaeciensis_DSM_17395 1
Phaeobacter_gallaeciensis_DSM_26640 1
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 0
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi 0
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 0
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 0
Ehrlichia_muris_AS145 0
Ehrlichia_ruminantium_str._Welgevonden 0
Ehrlichia_ruminantium_str._Welgevonden 0
Anaplasma_marginale_str._Dawn 0
Anaplasma_marginale_str._Gypsy_Plains 0
Anaplasma_marginale_str._St._Maries 0
Orientia_tsutsugamushi_str._Ikeda 0
Methylobacterium_extorquens_PA1 0
Mannheimia_succiniciproducens_MBEL55E 0
Mannheimia_haemolytica_USMARC_2286 1
Mannheimia_haemolytica_D174 1
Pasteurella_multocida_subsp._multocida_str._HN06 1
Idiomarina_loihiensis_GSL_199 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Xanthomonas_campestris_pv._raphani_756C 0
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 2
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_MDR-ZJ06 2
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1

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Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   2

Others
Genome     Number
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
Acholeplasma_laidlawii_PG-8A_(duplicate) 0
Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 0
NCBI_plasmid_sequences_(Plasmids) 1
UniProt__viral_sequences_(Viral) 16
NCBI_viral_sequences_(Viral) 22
STRING_v9.0.5_(STRING) 43
TargetDB__(Targets) 1
Uniprot_2018_03_genome 3405
NCBI_2017_08_genome 6873

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