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Domain combinations for _gap_,75005,49785,49785 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

75005 - Arabinanase/levansucrase/invertase
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Butyrivibrio_proteoclasticus_B316 0
Paenibacillus_mucilaginosus_3016 1
Paenibacillus_polymyxa_M1 1
Bacteroides_fragilis_YCH46 0

Strains
Genome     Number
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 1
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0

Others
Genome     Number
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 315
NCBI_2017_08_genome 68

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.