SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,75005,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

75005 - Arabinanase/levansucrase/invertase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Adineta_vaga 1
Meloidogyne_incognita_   (Southern root-knot nematode)   2
Meloidogyne_hapla_ 2
Schistosoma_mansoni_ 1
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 1
Magnaporthe_poae_ATCC_64411_22 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Sclerotinia_sclerotiorum_ 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Cochliobolus_lunatus_m118_v2.0 1
Mycosphaerella_graminicola_IPO323_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Aspergillus_versicolor_v1.0 1
Neosartorya_fischeri_NRRL_181_ 1
Kluyveromyces_waltii 1
Gossypium_raimondii_v221 2
Citrus_sinensis_v154   (Sweet orange)   1
Glycine_max_v109   (Soybean)   2
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Chlorella_variabilis_sp._NC64A_ 0
Volvox_carteri_f._nagariensis_ 2
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 1
Bigelowiella_natans_CCMP2755_22 1
Trypanosoma_congolense_2.4 1
Ectocarpus_siliculosus 1
Aureococcus_anophagefferens_ 1
Pythium_arrhenomanes_ATCC_12531_22 0
Phytophthora_infestans_T30-4_ 0
Thalassiosira_pseudonana_CCMP1335 1
Symbiodinium_minutum_clade_B1_v1.2 0
Emiliania_huxleyi_CCMP1516_ 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Saccharomonospora_viridis_DSM_43017 1
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 1
Verrucosispora_maris_AB-18-032 0
Actinoplanes_sp._SE50/110 0
Corynebacterium_kroppenstedtii_DSM_44385 1
Beutenbergia_cavernae_DSM_12333 0
Microbacterium_testaceum_StLB037 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 0
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Bifidobacterium_longum_subsp._longum_JDM301 0
Bifidobacterium_dentium_Bd1 1
Actinomyces_sp._F0330 1
Roseiflexus_castenholzii_DSM_13941 1
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Eubacterium_siraeum 1
Ethanoligenens_harbinense_YUAN-3 1
Ruminococcus_albus_7 0
Clostridium_saccharolyticum_WM1 0
Roseburia_hominis_A2-183 1
Roseburia_intestinalis 2
Butyrivibrio_proteoclasticus_B316 1
Butyrivibrio_fibrisolvens 0
Clostridium_sp._BNL1100 0
Clostridium_novyi_NT 1
Clostridium_cellulovorans_743B 1
Clostridium_acetobutylicum_ATCC_824 1
Caldicellulosiruptor_hydrothermalis_108 1
Caldicellulosiruptor_owensensis_OL 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 0
Melissococcus_plutonius_DAT561 2
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 0
Leuconostoc_gasicomitatum_LMG_18811 0
Lactobacillus_crispatus_ST1 1
Lactobacillus_johnsonii_FI9785 1
Lactobacillus_sanfranciscensis_TMW_1.1304 1
Streptococcus_pneumoniae_P1031 1
Streptococcus_mutans_NN2025 1
Streptococcus_salivarius_57.I 1
Paenibacillus_sp._JDR-2 2
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 1
Paenibacillus_polymyxa_M1 1
Bacillus_sp._JS 1
Bacillus_amyloliquefaciens_FZB42 1
Bacillus_atrophaeus_1942 1
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_cellulosilyticus_DSM_2522 1
Bacillus_megaterium_DSM_319 2
Belliella_baltica_DSM_15883 1
Paludibacter_propionicigenes_WB4 1
Prevotella_ruminicola_23 1
Bacteroides_vulgatus_ATCC_8482 3
Bacteroides_thetaiotaomicron_VPI-5482 1
Pedobacter_saltans_DSM_12145 1
Solitalea_canadensis_DSM_3403 1
Gramella_forsetii_KT0803 1
Cellulophaga_algicola_DSM_14237 1
Flavobacterium_johnsoniae_UW101 1
Planctomyces_brasiliensis_DSM_5305 1
Rhodopirellula_baltica_SH_1 1
Opitutus_terrae_PB90-1 0
Spirochaeta_thermophila_DSM_6192 2
Desulfovibrio_africanus_str._Walvis_Bay 1
Geobacter_metallireducens_GS-15 0
Burkholderia_phymatum_STM815 1
Burkholderia_thailandensis_E264 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 2
Burkholderia_cenocepacia_HI2424 1
Burkholderia_vietnamiensis_G4 1
Asticcacaulis_excentricus_CB_48 0
Sphingopyxis_alaskensis_RB2256 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Saccharophagus_degradans_2-40 0
Cellvibrio_japonicus_Ueda107 0
Shewanella_putrefaciens_CN-32 0
Klebsiella_oxytoca_E718 2

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Strains
Genome     Number
Hordeum_vulgare_22   (Domesticated barley)   1
Prochlorococcus_marinus_str._MIT_9313 1
Mesoplasma_florum_W37 1
Spiroplasma_diminutum_CUAS-1 1
Streptomyces_rapamycinicus_NRRL_5491 0
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_longum_NCC2705 2
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Bifidobacterium_longum_subsp._longum_BBMN68 1
Bifidobacterium_longum_subsp._longum_F8 2
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_asteroides_PRL2011 1
Actinomyces_viscosus_C505 1
Eubacterium_siraeum_V10Sc8a 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Ruminococcus_champanellensis_18P13 0
Roseburia_intestinalis_XB6B4 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_pasteurianum_BC1 3
Clostridium_botulinum_BKT015925 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 0
Leuconostoc_gelidum_JB7 0
Lactobacillus_johnsonii_N6.2 1
Lactobacillus_johnsonii_DPC_6026 1
Lactobacillus_johnsonii_NCC_533 1
Lactobacillus_reuteri_TD1 1
Lactobacillus_reuteri_I5007 1
Lactobacillus_reuteri_SD2112 1
Lactobacillus_plantarum_16 1
Streptococcus_pneumoniae_gamPNI0373 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_R6 1
Streptococcus_mutans_GS-5 1
Streptococcus_mutans_LJ23 1
Streptococcus_mutans_UA159 1
Streptococcus_salivarius_CCHSS3 1
Streptococcus_salivarius_JIM8777 1
Thermobacillus_composti_KWC4 1
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 2
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_CC178 1
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_IT-45 1
Bacillus_amyloliquefaciens_XH7 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_amyloliquefaciens_TA208 1
Bacillus_amyloliquefaciens_DSM_7 1
Bacillus_licheniformis_9945A 1
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1
Bacillus_subtilis_subsp._natto_BEST195 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_thuringiensis_MC28 1
Bacillus_megaterium_WSH-002 2
Bacillus_megaterium_QM_B1551 2
Echinicola_vietnamensis_DSM_17526 2
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 3
Singulisphaera_acidiphila_DSM_18658 1
Spirochaeta_thermophila_DSM_6578 1
Geobacter_sp._M18 1
Sorangium_cellulosum_So0157-2 1
Burkholderia_sp._KJ006 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_cepacia_GG4 1
Phaeobacter_gallaeciensis_DSM_26640 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Gluconobacter_oxydans_H24 1
Vibrio_sp._EJY3 1
Shewanella_sp._W3-18-1 0
Shewanella_baltica_OS223 0
Shewanella_putrefaciens_200 0
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Klebsiella_oxytoca_KCTC_1686 1
Natronococcus_occultus_SP4 1

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Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
NCBI_plasmid_sequences_(Plasmids) 3
PDB_chains_(SCOP_1.75)_(PDB) 3
TargetDB__(Targets) 10
Protein_Data_Bank_(all_PDB_sequenc) 18
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 74
STRING_v9.0.5_(STRING) 68
UniProt__viral_sequences_(Viral) 1
Uniprot_2018_03_genome 11505
NCBI_viral_sequences_(Viral) 1
NCBI_2017_08_genome 6086

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