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  Home > SCOP hierarchy > Domain combination - _gap_,81901

Domain combinations for _gap_,81901 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81901 - HCP-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   6
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   2
Rattus_norvegicus_76_5.0   (Norway rat)   2
Mus_musculus_76_38   (House mouse)   4
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   2
Ochotona_princeps_76   (American pika)   2
Tupaia_belangeri_76   (Northern tree shrew)   1
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   2
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_76_1   (Giant panda)   2
Canis_familiaris_76_3.1   (Dog)   3
Felis_catus_76_6.2   (Domestic cat)   2
Equus_caballus_76_2   (Horse)   2
Myotis_lucifugus_76_2.0   (Little brown bat)   2
Pteropus_vampyrus_76_1   (Large flying fox)   3
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   2
Procavia_capensis_76_1   (Cape rock hyrax)   2
Loxodonta_africana_76_3   (African savanna elephant)   3
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2
Macropus_eugenii_76_1.0   (Tammar wallaby)   3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   3
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Saccoglossus_kowalevskii_v3.0 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   2
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   3
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   7
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   2
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   2
Oikopleura_dioica 2
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 9
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 1
Capitella_sp._I_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   2
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 1
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   2
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   4
Strigamia_maritima_22 1
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 1
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   3
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   3
Hydra_vulgaris 1
Amphimedon_queenslandica 1
Trichoplax_adhaerens_ 3
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 1
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 2
Mortierella_verticillata_NRRL_6337_ 5
Phycomyces_blakesleeanus_ 11
Rhizopus_oryzae_RA_99-880_ 9
Mucor_circinelloides_ 6
Rhizomucor_miehei_CAU432_ 8
Malassezia_globosa_CBS_7966_ 4
Sporisorium_reilianum_22 2
Ustilago_maydis_ 3
Mixia_osmundae_IAM_14324_v1.0 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 3
Microbotryum_violaceum_22 2
Wallemia_sebi_v1.0 2
Sphaerobolus_stellatus_v1.0 7
Piloderma_croceum_F_1598_v1.0 5
Serpula_lacrymans_var._lacrymans_S7.9_ 2
Coniophora_puteana 3
Hydnomerulius_pinastri_v2.0 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 3
Pisolithus_microcarpus_441_v1.0 2
Pisolithus_tinctorius_Marx_270_v1.0 3
Scleroderma_citrinum_Foug_A_v1.0 4
Coprinopsis_cinerea_okayama7_130_v3 4
Pleurotus_ostreatus_   (Oyster mushroom)   4
Amanita_thiersii_Skay4041_v1.0 3
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3
Galerina_marginata_v1.0 3
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 4
Agaricus_bisporus_var._bisporus_ 2
Schizophyllum_commune_ 4
Stereum_hirsutum_FP-91666_SS1__v1.0 1
Heterobasidion_annosum_ 2
Gloeophyllum_trabeumv1.0 3
Punctularia_strigosozonata_v1.0 2
Sebacina_vermifera_MAFF_305830_v1.0 5
Fomitiporia_mediterranea_v1.0 2
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 3
Wolfiporia_cocos_MD-104_SS10__v1.0 3
Fomitopsis_pinicolav1.0 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 1
Trametes_versicolor_v1.0 2
Tremella_mesenterica_   (Witches' butter)   2
Daldinia_eschscholzii_EC12_v1.0 4
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 3
Magnaporthe_grisea_70-15_ 3
Podospora_anserina_ 4
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 3
Chaetomium_globosum_CBS_148.51_ 4
Neurospora_tetrasperma_ 4
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 4
Cryphonectria_parasitica_   (Chestnut blight fungus)   3
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 4
Acremonium_alcalophilumv_1.0 5
Glomerella_graminicola_22 5
Fusarium_graminearum_ 4
Nectria_haematococca_mpVI_ 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 4
Fusarium_verticillioides_7600_ 3
Trichoderma_asperellum_CBS_433.97_v1.0 3
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 4
Trichoderma_reesei_1.2 4
Trichoderma_virens_Gv29-8_ 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   4
Botrytis_cinerea_B05.10_ 2
Sclerotinia_sclerotiorum_ 4
Blumeria_graminis_22 4
Didymella_exigua_CBS_183.55_v1.0 4
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3
Cochliobolus_victoriae_FI3_v1.0 3
Cochliobolus_carbonum_26-R-13_v1.0 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4
Alternaria_brassicicola_ 3
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 3
Pyrenophora_tritici-repentis_ 3
Stagonospora_nodorum_ 3
Mycosphaerella_graminicola_IPO323_ 2
Zasmidium_cellare_ATCC_36951_v1.0 3
Dothistroma_septosporum 4
Septoria_musiva_v1.0 4
Mycosphaerella_fijiensis_CIRAD86_ 4
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 4
Coccidioides_immitis_RS_ 3
Ajellomyces_dermatitidis_SLH14081_ 4
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2
Microsporum_canis_CBS_113480_ 3
Trichophyton_equinum_CBS_127.97_ 4
Trichophyton_verrucosum_HKI_0517_ 3
Arthroderma_benhamiae_CBS_112371_ 3
Trichophyton_tonsurans_CBS_112818_ 3
Trichophyton_rubrum_CBS_118892_ 4
Uncinocarpus_reesii_1704_ 3
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 4
Aspergillus_fumigatus_Af293 2
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 3
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 4
Aspergillus_carbonarius_ITEM_5010_ 3
Neosartorya_fischeri_NRRL_181_ 2
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 4
Aspergillus_wentii_v1.0 5
Aspergillus_oryzae_RIB40_ 3
Aspergillus_niger_22 4
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 3
Penicillium_marneffei_ATCC_18224_ 4
Tuber_melanosporum_Mel28_22 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3
Hansenula_polymorpha_v2.0 2
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2
Candida_dubliniensis_CD36_ 2
Candida_tropicalis_MYA-3404_ 3
Candida_parapsilosis_ 4
Candida_albicans_SC5314 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2
Pichia_stipitis_CBS_6054_ 3
Candida_guilliermondii_ATCC_6260_ 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 3
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 3
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 3
Ashbya_gossypii_ATCC_10895_ 2
Zygosaccharomyces_rouxii_ 2
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   2
Saccharomyces_bayanus_MIT 1
Kluyveromyces_lactis 2
Schizosaccharomyces_cryophilus_OY26_22 3
Schizosaccharomyces_octosporus_yFS286_ 3
Schizosaccharomyces_japonicus_yFS275_ 3
Schizosaccharomyces_pombe   (Fission yeast)   4
Catenaria_anguillulae_PL171_v1.0 4
Allomyces_macrogynus_ATCC_38327_ 9
Spizellomyces_punctatus_DAOM_BR117_ 6
Dictyostelium_discoideum 3
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 8
Pinus_taeda   (Loblolly pine)   14
Picea_abies   (Norway spruce)   31
Eucalyptus_grandis_v201   (Rose gum)   17
Theobroma_cacao_B97-61/B2_v1   (Cacao)   10
Gossypium_raimondii_v221 32
Citrus_clementina_v165 14
Citrus_sinensis_v154   (Sweet orange)   16
Thellungiella_halophila_v173 10
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   9
Capsella_rubella_v183 9
Arabidopsis_lyrata_   (Lyrate rockcress)   10
Arabidopsis_thaliana_10   (Thale cress)   20
Carica_papaya_   (Papaya)   17
Medicago_truncatula_   (Barrel medic)   29
Phaseolus_vulgaris_v186   (French bean)   15
Glycine_max_v109   (Soybean)   15
Cucumis_sativus_v122   (Cucumber)   15
Fragaria_vesca_   (Wild strawberry)   9
Malus_domestica_v196   (Apple)   12
Prunus_persica_v139   (Peach)   11
Linum_usitatissimum_v200   (Flax)   12
Manihot_esculenta_v147   (Cassava)   13
Populus_trichocarpa_v156   (Black cottonwood)   12
Vitis_vinifera_   (Wine grape)   9
Mimulus_guttatus_v140   (Spotted monkey flower)   15
Solanum_lycopersicum_v.2.3   (Tomato)   11
Solanum_tuberosum_   (Potato)   17
Actinidia_chinensis_Hongyang_ 11
Aquilegia_coerulea_v195 11
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   19
Aegilops_tauschii_22 11
Brachypodium_distachyon_   (Stiff brome)   10
Oryza_barthii_22   (African wild rice)   15
Oryza_meridionalis_22 8
Oryza_glumaepatula_22 14
Oryza_glaberrima   (African rice)   12
Oryza_punctata_22 13
Oryza_nivara_22 17
Oryza_brachyantha_22   (Malo sina)   10
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   16
Oryza_sativa_v193   (Rice)   16
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   11
Panicum_virgatum_v202   (Switchgrass)   21
Setaria_italica_v164   (Foxtail millet)   13
Zea_mays_subsp._mays_   (Maize)   11
Zea_mays_v181   (Maize)   11
Sorghum_bicolor_   (Sorghum)   6
Musa_balbisiana   (Balbis banana)   10
Musa_acuminata_22   (Wild Malaysian banana)   15
Amborella_trichopoda_22 14
Physcomitrella_patens 1
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 2
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 1
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 29
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 4
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 8
Giardia_lamblia_2.3 0
Cyanophora_paradoxa_ 2
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 2
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 3
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 2
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 3
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 0
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 3
Fragilariopsis_cylindrus 4
Thalassiosira_pseudonana_CCMP1335 4
Perkinsus_marinus_ATCC_50983_ 2
Paramecium_tetraurelia_ 3
Tetrahymena_thermophila_SB210_1_ 4
Ichthyophthirius_multifiliis_strain_G5_ 1
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 8
Naegleria_gruberi_ 9
Trichomonas_vaginalis_ 16
Guillardia_theta_CCMP2712_v1.0_ 8
Emiliania_huxleyi_CCMP1516_ 5
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 0
Microcoleus_sp._PCC_7113 2
Gloeocapsa_sp._PCC_7428 0
Rivularia_sp._PCC_7116 0
'Nostoc_azollae'_0708 0
Anabaena_sp._90 0
Cryptobacterium_curtum_DSM_15641 1
Slackia_heliotrinireducens_DSM_20476 1
Thermobispora_bispora_DSM_43833 0
Catenulispora_acidiphila_DSM_44928 0
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_sp._EAN1pec 0
Frankia_alni_ACN14a 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 1
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_avermitilis_MA-4680 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Pseudonocardia_dioxanivorans_CB1190 0
Actinoplanes_sp._N902-109 1
Actinoplanes_missouriensis_431 1
Nocardia_cyriacigeorgica_GUH-2 1
Nocardia_farcinica_IFM_10152 1
Mycobacterium_avium_104 0
Sanguibacter_keddieii_DSM_10542 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 0
Roseiflexus_sp._RS-1 1
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Deinococcus_radiodurans_R1 0
Oceanithermus_profundus_DSM_14977 0
Thermus_scotoductus_SA-01 0
Veillonella_parvula_DSM_2008 0
Acidaminococcus_intestini_RyC-MR95 1
Acidaminococcus_fermentans_DSM_20731 0
Selenomonas_sputigena_ATCC_35185 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1
Eubacterium_siraeum 1
Clostridium_thermocellum_ATCC_27405 1
Ethanoligenens_harbinense_YUAN-3 0
Faecalibacterium_prausnitzii 1
Ruminococcus_albus_7 0
Oscillibacter_valericigenes_Sjm18-20 2
butyrate-producing_bacterium_SS3/4 0
Candidatus_Desulforudis_audaxviator_MP104C 1
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 0
Syntrophobotulus_glycolicus_DSM_8271 0
Desulfitobacterium_hafniense_Y51 1
Desulfitobacterium_dehalogenans_ATCC_51507 0
Desulfotomaculum_acetoxidans_DSM_771 0
Acetobacterium_woodii_DSM_1030 0
Eubacterium_limosum_KIST612 1
Clostridium_saccharolyticum_WM1 0
Clostridium_lentocellum_DSM_5427 1
Coprococcus_sp._ART55/1 0
Heliobacterium_modesticaldum_Ice1 2
Clostridium_sp._BNL1100 0
Clostridium_kluyveri_DSM_555 0
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 0
Clostridium_botulinum_A_str._ATCC_3502 1
Thermodesulfobium_narugense_DSM_14796 1
Oenococcus_oeni_PSU-1 1
Lactobacillus_salivarius_CECT_5713 0
Lactococcus_lactis_subsp._cremoris_MG1363 1
Streptococcus_infantarius_subsp._infantarius_CJ18 0
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_sp._JDR-2 1
Paenibacillus_mucilaginosus_3016 1
Lysinibacillus_sphaericus_C3-41 0
Oceanobacillus_iheyensis_HTE831 0
Bacillus_cellulosilyticus_DSM_2522 1
Melioribacter_roseus_P3M 0
Ignavibacterium_album_JCM_16511 1
Chlorobium_phaeovibrioides_DSM_265 0
Chloroherpeton_thalassium_ATCC_35110 0
Haliscomenobacter_hydrossis_DSM_1100 0
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Flexibacter_litoralis_DSM_6794 0
Candidatus_Amoebophilus_asiaticus_5a2 1
Cyclobacterium_marinum_DSM_745 1
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 0
Dyadobacter_fermentans_DSM_18053 1
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 1
Paludibacter_propionicigenes_WB4 1
Odoribacter_splanchnicus_DSM_20712 0
Bacteroides_sp._CF50 0
Porphyromonas_asaccharolytica_DSM_20707 1
Porphyromonas_gingivalis_ATCC_33277 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Sphingobacterium_sp._21 1
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 1
Krokinobacter_sp._4H-3-7-5 0
Lacinutrix_sp._5H-3-7-4 1
Maribacter_sp._HTCC2170 0
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 2
Muricauda_ruestringensis_DSM_13258 0
Cellulophaga_algicola_DSM_14237 0
Ornithobacterium_rhinotracheale_DSM_15997 1
Capnocytophaga_canimorsus_Cc5 0
Capnocytophaga_ochracea_DSM_7271 1
Weeksella_virosa_DSM_16922 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_branchiophilum_FL-15 1
Candidatus_Protochlamydia_amoebophila_UWE25 3
Parachlamydia_acanthamoebae_UV-7 0
Simkania_negevensis_Z 0
Chlamydophila_abortus_S26/3 1
Chlamydia_psittaci_01DC11 1
Chlamydia_trachomatis_B/Jali20/OT 0
Planctomyces_brasiliensis_DSM_5305 0
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 4
Fretibacterium_fastidiosum 1
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2
Leptospira_interrogans_serovar_Lai_str._IPAV 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_murdochii_DSM_12563 0
Brachyspira_pilosicoli_95/1000 0
Brachyspira_hyodysenteriae_WA1 0
Borrelia_garinii_PBi 1
Borrelia_bissettii_DN127 1
Borrelia_afzelii_PKo 0
Borrelia_burgdorferi_B31 1
Borrelia_recurrentis_A1 0
Sphaerochaeta_pleomorpha_str._Grapes 1
Sphaerochaeta_globus_str._Buddy 0
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 2
Treponema_succinifaciens_DSM_2489 2
Treponema_denticola_ATCC_35405 0
Desulfurispirillum_indicum_S5 0
Deferribacter_desulfuricans_SSM1 0
Kosmotoga_olearia_TBF_19.5.1 0
Fervidobacterium_pennivorans_DSM_9078 0
Thermosipho_melanesiensis_BI429 1
Thermosipho_africanus_TCF52B 1
Thermovibrio_ammonificans_HB-1 1
Sulfurihydrogenibium_sp._YO3AOP1 1
Sulfurihydrogenibium_azorense_Az-Fu1 1
Hydrogenobaculum_sp._Y04AAS1 0
Elusimicrobium_minutum_Pei191 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 1
Candidatus_Koribacter_versatilis_Ellin345 1
Candidatus_Nitrospira_defluvii 1
Leptospirillum_ferrooxidans_C2-3 0
Streptobacillus_moniliformis_DSM_12112 1
Sebaldella_termitidis_ATCC_33386 5
Leptotrichia_buccalis_C-1013-b 3
Ilyobacter_polytropus_DSM_2926 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 0
Candidatus_Methylomirabilis_oxyfera 1
Acidithiobacillus_caldus_SM-1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 1
Bacteriovorax_marinus_SJ 0
Nitratifractor_salsuginis_DSM_16511 1
Arcobacter_sp._L 1
Arcobacter_nitrofigilis_DSM_7299 0
Campylobacter_curvus_525.92 2
uncultured_Sulfuricurvum_sp._RIFRC-1 1
Sulfurimonas_denitrificans_DSM_1251 0
Helicobacter_cetorum_MIT_00-7128 0
Helicobacter_bizzozeronii_CIII-1 6
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_mustelae_12198 0
Helicobacter_felis_ATCC_49179 6
Helicobacter_cinaedi_PAGU611 2
Helicobacter_acinonychis_str._Sheeba 1
Helicobacter_pylori_B38 1
Nitratiruptor_sp._SB155-2 0
Sulfurovum_sp._NBC37-1 1
Desulfobacca_acetoxidans_DSM_11109 0
Desulfomonile_tiedjei_DSM_6799 1
Desulfobulbus_propionicus_DSM_2032 2
Desulfatibacillum_alkenivorans_AK-01 0
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_piezophilus 1
Desulfovibrio_magneticus_RS-1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 0
Desulfovibrio_salexigens_DSM_2638 0
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Geobacter_daltonii_FRC-32 2
Geobacter_uraniireducens_Rf4 0
Geobacter_bemidjiensis_Bem 1
Babela_massiliensis 1
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_sp._Fw109-5 0
Stigmatella_aurantiaca_DW4/3-1 0
Myxococcus_fulvus_HW-1 0
Azoarcus_sp._KH32C 1
Azoarcus_sp._BH72 1
Pseudogulbenkiania_sp._NH8B 0
Chromobacterium_violaceum_ATCC_12472 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
beta_proteobacterium_CB 0
Thiomonas_arsenitoxydans 0
Leptothrix_cholodnii_SP-6 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 1
Cupriavidus_metallidurans_CH34 1
Ralstonia_pickettii_12D 2
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 2
Burkholderia_pseudomallei_1106a 2
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 2
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_vietnamiensis_G4 3
Burkholderia_gladioli_BSR3 3
Burkholderia_glumae_BGR1 1
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 0
Polaromonas_sp._JS666 0
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 0
Acidovorax_sp._JS42 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Comamonas_testosteroni_CNB-2 0
Collimonas_fungivorans_Ter331 0
Taylorella_asinigenitalis_MCE3 1
Taylorella_equigenitalis_MCE9 0
Bordetella_petrii_DSM_12804 0
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 1
Nitrosospira_multiformis_ATCC_25196 2
Nitrosomonas_europaea_ATCC_19718 0
Sideroxydans_lithotrophicus_ES-1 0
Methylovorus_sp._MP688 0
Methylovorus_glucosetrophus_SIP3-4 0
Magnetococcus_marinus_MC-1 1
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 2
Brevundimonas_subvibrioides_ATCC_15264 2
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Phenylobacterium_zucineum_HLK1 2
Novosphingobium_aromaticivorans_DSM_12444 0
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 0
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1
Maricaulis_maris_MCS10 2
Hirschia_baltica_ATCC_49814 0
Hyphomonas_neptunium_ATCC_15444 0
Dinoroseobacter_shibae_DFL_12 1
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 1
Rhodobacter_sphaeroides_ATCC_17029 0
Paracoccus_denitrificans_PD1222 0
Tistrella_mobilis_KA081020-065 0
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_centenum_SW 0
Rhodospirillum_rubrum_F11 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 1
Polymorphum_gilvum_SL003B-26A1 2
Micavibrio_aeruginosavorus_ARL-13 0
Candidatus_Puniceispirillum_marinum_IMCC1322 2
Rickettsia_bellii_OSU_85-389 1
Rickettsia_canadensis_str._McKiel 1
Rickettsia_typhi_str._Wilmington 1
Rickettsia_philipii_str._364D 1
Rickettsia_felis_URRWXCal2 0
Rickettsia_slovaca_13-B 1
Rickettsia_japonica_YH 1
Rickettsia_montanensis_str._OSU_85-930 0
Rickettsia_rickettsii_str._'Sheila_Smith' 1
Starkeya_novella_DSM_506 3
Xanthobacter_autotrophicus_Py2 4
Azorhizobium_caulinodans_ORS_571 3
Methylobacterium_chloromethanicum_CM4 2
Methylobacterium_extorquens_AM1 2
Methylobacterium_sp._4-46 4
Methylobacterium_populi_BJ001 3
Methylobacterium_nodulans_ORS_2060 4
Methylobacterium_radiotolerans_JCM_2831 3
Parvibaculum_lavamentivorans_DS-1 3
Ochrobactrum_anthropi_ATCC_49188 2
Brucella_microti_CCM_4915 2
Brucella_pinnipedialis_B2/94 2
Brucella_canis_ATCC_23365 2
Brucella_suis_ATCC_23445 2
Brucella_melitensis_ATCC_23457 2
Brucella_ovis_ATCC_25840 2
Brucella_abortus_S19 2
Sinorhizobium_fredii_NGR234 2
Sinorhizobium_medicae_WSM419 2
Sinorhizobium_meliloti_AK83 2
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3
Rhizobium_etli_CIAT_652 2
Rhizobium_leguminosarum_bv._viciae_3841 2
Agrobacterium_tumefaciens_str._C58 2
Agrobacterium_radiobacter_K84 2
Agrobacterium_sp._H13-3 2
Agrobacterium_vitis_S4 1
Candidatus_Liberibacter_asiaticus_str._psy62 1
Mesorhizobium_sp._BNC1 2
Mesorhizobium_opportunistum_WSM2075 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2
Mesorhizobium_loti_MAFF303099 2
Methylocella_silvestris_BL2 3
Beijerinckia_indica_subsp._indica_ATCC_9039 5
Pelagibacterium_halotolerans_B2 1
Rhodomicrobium_vannielii_ATCC_17100 3
Hyphomicrobium_sp._MC1 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Oligotropha_carboxidovorans_OM4 3
Rhodopseudomonas_palustris_BisA53 5
Nitrobacter_winogradskyi_Nb-255 3
Nitrobacter_hamburgensis_X14 4
Bradyrhizobium_japonicum_USDA_110 6
Bradyrhizobium_sp._ORS_278 3
Methylocystis_sp._SC2 3
Bartonella_tribocorum_CIP_105476 1
Bartonella_clarridgeiae_73 0
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 1
Bartonella_quintana_str._Toulouse 1
Bartonella_bacilliformis_KC583 0
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 0
Aggregatibacter_aphrophilus_NJ8700 1
Aggregatibacter_actinomycetemcomitans_D7S-1 4
Haemophilus_somnus_129PT 1
Pasteurella_multocida_subsp._multocida_str._3480 1
Haemophilus_parainfluenzae_T3T1 1
Actinobacillus_succinogenes_130Z 0
Oceanimonas_sp._GK1 1
Tolumonas_auensis_DSM_9187 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2
Vibrio_splendidus_LGP32 2
Vibrio_anguillarum_775 1
Vibrio_vulnificus_MO6-24/O 1
Vibrio_cholerae_O395 1
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 0
Psychromonas_sp._CNPT3 2
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 2
Shewanella_loihica_PV-4 2
Shewanella_halifaxensis_HAW-EB4 2
Shewanella_sediminis_HAW-EB3 3
Shewanella_denitrificans_OS217 2
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 3
Shewanella_baltica_OS185 1
Shewanella_woodyi_ATCC_51908 3
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Shewanella_frigidimarina_NCIMB_400 2
Shewanella_putrefaciens_CN-32 2
Colwellia_psychrerythraea_34H 2
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 1
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_sp._4H-3-7+YE-5 2
Glaciecola_nitratireducens_FR1064 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 2
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 1
Rhodanobacter_denitrificans 1
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Alkalilimnicola_ehrlichii_MLHE-1 2
Halorhodospira_halophila_SL1 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_watsonii_C-113 0
Nitrosococcus_halophilus_Nc4 0
Nitrosococcus_oceani_ATCC_19707 0
Coxiella_burnetii_Dugway_5J108-111 1
Legionella_longbeachae_NSW150 1
Legionella_pneumophila_str._Corby 1
gamma_proteobacterium_HdN1 1
Providencia_stuartii_MRSN_2154 1
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Dickeya_zeae_Ech1591 1
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 1
Pectobacterium_atrosepticum_SCRI1043 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Sodalis_glossinidius_str._'morsitans' 1
Erwinia_sp._Ejp617 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Shigella_flexneri_5_str._8401 1
Shigella_boydii_CDC_3083-94 1
Escherichia_fergusonii_ATCC_35469 1
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 2
Pseudomonas_fulva_12-X 1
Pseudomonas_putida_F1 1
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 2
Psychrobacter_sp._G 1
Psychrobacter_sp._PRwf-1 1
Psychrobacter_arcticus_273-4 1
Psychrobacter_cryohalolentis_K5 1
Moraxella_catarrhalis_RH4 0
Acinetobacter_oleivorans_DR1 3
Acinetobacter_sp._ADP1 1
Francisella_sp._TX077308 0
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 0
Francisella_tularensis_subsp._tularensis_WY96-3418 0
Francisella_cf._novicida_3523 0
Francisella_novicida_U112 0
Methanocella_arvoryzae_MRE50 2
Methanocella_conradii_HZ254 0
Methanospirillum_hungatei_JF-1 1
Pyrococcus_furiosus_COM1 0
Thermoplasmatales_archaeon_BRNA1 1
Methanotorris_igneus_Kol_5 1
Methanocaldococcus_sp._FS406-22 1
Methanocaldococcus_jannaschii_DSM_2661 1
Methanococcus_voltae_A3 0
Methanothermobacter_thermautotrophicus_str._Delta_H 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 2
Cryptococcus_neoformans_B-3501A_ 2
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 3
Paracoccidioides_brasiliensis_Pb03_ 3
Coccidioides_posadasii_str._Silveira_ 4
Coccidioides_immitis_RMSCC_3703_ 4
Coccidioides_immitis_RMSCC_2394_ 3
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 4
Histoplasma_capsulatum_H143 3
Histoplasma_capsulatum_H88 4
Histoplasma_capsulatum_G186AR 4
Aspergillus_fumigatus_A1163_ 2
Candida_albicans_WO-1_ 3
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 2
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 2
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 3
Saccharomyces_cerevisiae_Sigma1278b 2
Saccharomyces_cerevisiae_W303 2
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_M22 0
Saccharomyces_cerevisiae_T73 2
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 2
Saccharomyces_cerevisiae_YJM789 2
Saccharomyces_cerevisiae_RM11-1a 2
Saccharomyces_cerevisiae_RM11-1a_ 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2
Schizosaccharomyces_pombe_972h-_ 4
Batrachochytrium_dendrobatidis_JEL423_ 2
Batrachochytrium_dendrobatidis_JAM81_ 3
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   12
Hordeum_vulgare_22   (Domesticated barley)   35
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   14
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 1
Chamaesiphon_minutus_PCC_6605 0
Synechococcus_sp._PCC_7002 1
Crinalium_epipsammum_PCC_9333 2
Oscillatoria_nigro-viridis_PCC_7112 1
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._ATCC_51142 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 0
Adlercreutzia_equolifaciens_DSM_19450 1
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Amycolatopsis_orientalis_HCCB10007 0
Nocardia_brasiliensis_ATCC_700358 3
Mycobacterium_avium_subsp._paratuberculosis_MAP4 0
Mycobacterium_avium_subsp._paratuberculosis_K-10 0
Bifidobacterium_thermophilum_RBL67 2
Bifidobacterium_animalis_subsp._lactis_Bl12 0
Bifidobacterium_animalis_subsp._lactis_B420 0
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 0
Bifidobacterium_animalis_subsp._lactis_BLC1 0
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 0
Bifidobacterium_animalis_subsp._lactis_Bi-07 0
Bifidobacterium_animalis_subsp._lactis_V9 0
Bifidobacterium_animalis_subsp._lactis_DSM_10140 0
Bifidobacterium_animalis_subsp._lactis_BB-12 0
Bifidobacterium_animalis_subsp._lactis_AD011 0
Chthonomonas_calidirosea_T49 1
Eubacterium_siraeum_V10Sc8a 1
Clostridium_thermocellum_DSM_1313 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Faecalibacterium_prausnitzii_L2-6 1
Ruminococcus_champanellensis_18P13 0
Clostridium_acidurici_9a 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Desulfitobacterium_hafniense_DCB-2 0
Desulfotomaculum_gibsoniae_DSM_7213 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 2
Coprococcus_catus_GD/7 1
Roseburia_intestinalis_XB6B4 0
Clostridium_kluyveri_NBRC_12016 0
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Thermacetogenium_phaeum_DSM_12270 1
Lactobacillus_salivarius_UCC118 0
Lactococcus_lactis_subsp._cremoris_KW2 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1
Lactococcus_lactis_subsp._cremoris_A76 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1
Lactococcus_lactis_subsp._cremoris_SK11 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 0
Streptococcus_lutetiensis_033 0
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Paenibacillus_polymyxa_SC2 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Amphibacillus_xylanus_NBRC_15112 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_megaterium_QM_B1551 0
Rhodothermus_marinus_SG0.5JP17-172 1
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_NCTC_9343 1
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 1
Chlamydia_psittaci_01DC12 1
Chlamydia_psittaci_WC 1
Chlamydia_psittaci_M56 1
Chlamydia_psittaci_WS/RT/E30 1
Chlamydia_psittaci_VS225 1
Chlamydia_psittaci_MN 1
Chlamydia_psittaci_GR9 1
Chlamydia_psittaci_84/55 1
Chlamydia_psittaci_08DC60 1
Chlamydia_psittaci_02DC15 1
Chlamydia_psittaci_C19/98 1
Chlamydia_psittaci_NJ1 1
Chlamydia_psittaci_CP3 1
Chlamydophila_psittaci_RD1 1
Chlamydia_psittaci_Mat116 1
Chlamydophila_psittaci_6BC 1
Chlamydophila_psittaci_6BC 1
Chlamydia_trachomatis_C/TW-3 0
Chlamydia_trachomatis_L2/434/Bu(f) 0
Chlamydia_trachomatis_L2/434/Bu(i) 0
Chlamydia_trachomatis_IU888 0
Chlamydia_trachomatis_IU824 0
Chlamydia_trachomatis_L2b/Canada2 0
Chlamydia_trachomatis_L2b/Canada1 0
Chlamydia_trachomatis_L3/404/LN 0
Chlamydia_trachomatis_L2b/Ams5 0
Chlamydia_trachomatis_L2b/Ams4 0
Chlamydia_trachomatis_L2b/Ams3 0
Chlamydia_trachomatis_L2b/Ams2 0
Chlamydia_trachomatis_L2b/Ams1 0
Chlamydia_trachomatis_L2b/795 0
Chlamydia_trachomatis_L2b/CV204 0
Chlamydia_trachomatis_L2b/LST 0
Chlamydia_trachomatis_L2b/UCH-2 0
Chlamydia_trachomatis_L2b/8200/07 0
Chlamydia_trachomatis_L2/25667R 0
Chlamydia_trachomatis_L1/224 0
Chlamydia_trachomatis_L1/115 0
Chlamydia_trachomatis_L1/440/LN 0
Chlamydia_trachomatis_K/SotonK1 0
Chlamydia_trachomatis_Ia/SotonIa3 0
Chlamydia_trachomatis_Ia/SotonIa1 0
Chlamydia_trachomatis_G/SotonG1 0
Chlamydia_trachomatis_F/SotonF3 0
Chlamydia_trachomatis_F/SW5 0
Chlamydia_trachomatis_F/SW4 0
Chlamydia_trachomatis_E/SotonE8 0
Chlamydia_trachomatis_E/SotonE4 0
Chlamydia_trachomatis_E/SW3 0
Chlamydia_trachomatis_D/SotonD6 0
Chlamydia_trachomatis_D/SotonD5 0
Chlamydia_trachomatis_D/SotonD1 0
Chlamydia_trachomatis_A/5291 0
Chlamydia_trachomatis_A/363 0
Chlamydia_trachomatis_RC-J/971 0
Chlamydia_trachomatis_RC-L2/55 0
Chlamydia_trachomatis_J/6276tet1 0
Chlamydia_trachomatis_RC-J/966 0
Chlamydia_trachomatis_RC-J(s)/122 0
Chlamydia_trachomatis_RC-F(s)/342 0
Chlamydia_trachomatis_RC-L2(s)/3 0
Chlamydia_trachomatis_RC-J/953 0
Chlamydia_trachomatis_RC-J943 0
Chlamydia_trachomatis_RC-Fs852 0
Chlamydia_trachomatis_RC-L2s46 0
Chlamydia_trachomatis_RC-F69 0
Chlamydia_trachomatis_L2c 0
Chlamydia_trachomatis_D-LC 0
Chlamydia_trachomatis_D-EC 0
Chlamydia_trachomatis_G/9301 0
Chlamydia_trachomatis_G/11074 0
Chlamydia_trachomatis_G/11222 0
Chlamydia_trachomatis_G/9768 0
Chlamydia_trachomatis_E/150 0
Chlamydia_trachomatis_E/11023 0
Chlamydia_trachomatis_B/TZ1A828/OT 0
Chlamydia_trachomatis_Sweden2 0
Chlamydia_trachomatis_E/Bour 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_L2b/UCH-1/proctitis 0
Chlamydia_trachomatis_434/Bu 0
Chlamydia_trachomatis_A/HAR-13 0
Chlamydia_trachomatis_D/UW-3/CX 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 2
Leptospira_interrogans_serovar_Lai_str._56601 3
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Brachyspira_pilosicoli_P43/6/78 1
Borrelia_garinii_NMJW1 1
Borrelia_garinii_BgVir 1
Borrelia_afzelii_HLJ01 0
Borrelia_afzelii_PKo 0
Borrelia_burgdorferi_CA382 1
Borrelia_burgdorferi_JD1 2
Borrelia_burgdorferi_N40 1
Borrelia_miyamotoi_LB-2001 0
Treponema_pedis_str._T_A4 1
Spirochaeta_thermophila_DSM_6578 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 0
Fusobacterium_nucleatum_subsp._animalis_4_8 0
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 0
Helicobacter_cetorum_MIT_99-5656 1
Helicobacter_pylori_BM012S 1
Helicobacter_pylori_BM012A 1
Helicobacter_pylori_SouthAfrica20 1
Helicobacter_pylori_UM298 1
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM037 1
Helicobacter_pylori_UM299 1
Helicobacter_pylori_UM032 1
Helicobacter_pylori_OK310 2
Helicobacter_pylori_OK113 1
Helicobacter_pylori_Rif2 1
Helicobacter_pylori_Rif1 1
Helicobacter_pylori_HUP-B14 1
Helicobacter_pylori_PeCan18 1
Helicobacter_pylori_Shi169 1
Helicobacter_pylori_Shi112 1
Helicobacter_pylori_Shi417 1
Helicobacter_pylori_XZ274 1
Helicobacter_pylori_Aklavik86 2
Helicobacter_pylori_Aklavik117 0
Helicobacter_pylori_SNT49 1
Helicobacter_pylori_Puno135 1
Helicobacter_pylori_Puno120 1
Helicobacter_pylori_ELS37 1
Helicobacter_pylori_Gambia94/24 1
Helicobacter_pylori_SouthAfrica7 1
Helicobacter_pylori_India7 1
Helicobacter_pylori_Lithuania75 1
Helicobacter_pylori_2017 1
Helicobacter_pylori_2018 1
Helicobacter_pylori_908 1
Helicobacter_pylori_F57 1
Helicobacter_pylori_F30 0
Helicobacter_pylori_F16 2
Helicobacter_pylori_Sat464 1
Helicobacter_pylori_Cuz20 1
Helicobacter_pylori_PeCan4 1
Helicobacter_pylori_SJM180 1
Helicobacter_pylori_B8 1
Helicobacter_pylori_52 2
Helicobacter_pylori_v225d 0
Helicobacter_pylori_83 2
Helicobacter_pylori_35A 2
Helicobacter_pylori_P12 1
Helicobacter_pylori_G27 1
Helicobacter_pylori_Shi470 1
Helicobacter_pylori_HPAG1 1
Helicobacter_pylori_51 1
Helicobacter_pylori_F32 1
Helicobacter_pylori_J99 1
Helicobacter_pylori_26695 1
Helicobacter_pylori_26695 1
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 1
Desulfovibrio_vulgaris_RCH1 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Desulfovibrio_vulgaris_str._Hildenborough 0
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_phenoliruptrix_BR3459a 1
Ralstonia_pickettii_12J 2
Ralstonia_solanacearum_FQY_4 2
Ralstonia_solanacearum_Po82 2
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 2
Ralstonia_solanacearum_GMI1000 2
Polynucleobacter_necessarius_subsp._necessarius_STIR1 0
Burkholderia_sp._YI23 2
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 2
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 2
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 2
Burkholderia_pseudomallei_K96243 2
Burkholderia_mallei_NCTC_10229 2
Burkholderia_mallei_NCTC_10247 2
Burkholderia_mallei_ATCC_23344 2
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 2
Burkholderia_cenocepacia_MC0-3 2
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_cepacia_GG4 3
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_EPS 0
Taylorella_asinigenitalis_14/45 2
Taylorella_equigenitalis_14/56 0
Taylorella_equigenitalis_ATCC_35865 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Nitrosomonas_sp._AL212 0
Sulfuricella_denitrificans_skB26 0
Caulobacter_crescentus_CB15 1
Zymomonas_mobilis_subsp._mobilis_CP4 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1
Zymomonas_mobilis_subsp._mobilis_ZM4 0
Phaeobacter_gallaeciensis_DSM_26640 1
Octadecabacter_arcticus_238 1
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_ATCC_17025 0
Rhodobacter_sphaeroides_2.4.1 0
Paracoccus_aminophilus_JCM_7686 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Rhodospirillum_rubrum_ATCC_11170 1
Micavibrio_aeruginosavorus_EPB 0
Rickettsia_bellii_RML369-C 1
Rickettsia_canadensis_str._CA410 1
Rickettsia_typhi_str._B9991CWPP 1
Rickettsia_typhi_str._TH1527 1
Rickettsia_slovaca_str._D-CWPP 1
Rickettsia_rickettsii_str._Arizona 1
Rickettsia_rickettsii_str._Brazil 1
Rickettsia_rickettsii_str._Hauke 1
Rickettsia_rickettsii_str._Colombia 1
Rickettsia_rickettsii__str._Hlp#2 1
Rickettsia_rickettsii_str._Hino 1
Rickettsia_rickettsii_str._Iowa 1
Methylobacterium_extorquens_DM4 2
Methylobacterium_extorquens_PA1 2
Brucella_ceti_TE10759-12 1
Brucella_ceti_TE28753-12 3
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 2
Brucella_suis_1330 2
Brucella_suis_1330 2
Brucella_melitensis_NI 2
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Brucella_melitensis_bv._1_str._16M 1
Brucella_abortus_A13334 1
Brucella_melitensis_biovar_Abortus_2308 2
Brucella_abortus_bv._1_str._9-941 2
Sinorhizobium_fredii_USDA_257 2
Sinorhizobium_fredii_HH103 2
Sinorhizobium_meliloti_2011 2
Sinorhizobium_meliloti_GR4 2
Sinorhizobium_meliloti_Rm41 2
Sinorhizobium_meliloti_SM11 2
Sinorhizobium_meliloti_BL225C 2
Sinorhizobium_meliloti_1021 3
Rhizobium_etli_CFN_42 3
Rhizobium_etli_bv._mimosae_str._Mim1 2
Rhizobium_tropici_CIAT_899 4
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2
Liberibacter_crescens_BT-1 2
Candidatus_Liberibacter_asiaticus_str._gxpsy 1
Mesorhizobium_australicum_WSM2073 2
Hyphomicrobium_nitrativorans_NL23 3
Hyphomicrobium_denitrificans_1NES1 1
Oligotropha_carboxidovorans_OM5 4
Oligotropha_carboxidovorans_OM5 4
Rhodopseudomonas_palustris_DX-1 3
Rhodopseudomonas_palustris_TIE-1 3
Rhodopseudomonas_palustris_HaA2 3
Rhodopseudomonas_palustris_BisB5 4
Rhodopseudomonas_palustris_BisB18 4
Rhodopseudomonas_palustris_CGA009 4
Bradyrhizobium_sp._S23321 5
Bradyrhizobium_sp._BTAi1 5
Bradyrhizobium_oligotrophicum_S58 4
Bradyrhizobium_japonicum_USDA_6 5
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 1
Bartonella_quintana_RM-11 1
Simiduia_agarivorans_SA1_=_DSM_21679 0
Mannheimia_succiniciproducens_MBEL55E 0
Aggregatibacter_actinomycetemcomitans_ANH9381 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1
Pasteurella_multocida_36950 1
Pasteurella_multocida_subsp._multocida_str._HN06 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_nigripulchritudo_VibrioScope 1
Vibrio_cholerae_LMA3984-4 2
Vibrio_cholerae_O395 1
Vibrio_cholerae_MJ-1236 1
Shewanella_sp._W3-18-1 2
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 2
Shewanella_putrefaciens_200 2
Glaciecola_psychrophila_170 2
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 1
Thalassolituus_oleivorans_MIL-1 0
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 2
Stenotrophomonas_maltophilia_R551-3 2
Xylella_fastidiosa_subsp._fastidiosa_GB514 0
Xylella_fastidiosa_9a5c 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Thioalkalivibrio_nitratireducens_DSM_14787 1
Coxiella_burnetii_CbuK_Q154 0
Coxiella_burnetii_CbuG_Q212 0
Coxiella_burnetii_RSA_331 0
Coxiella_burnetii_RSA_493 0
Legionella_pneumophila_str._Paris 0
Legionella_pneumophila_str._Lens 0
Legionella_pneumophila_subsp._pneumophila_LPE509 0
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 0
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 0
Legionella_pneumophila_2300/99_Alcoy 1
Proteus_mirabilis_BB2000 0
Morganella_morganii_subsp._morganii_KT 0
Rahnella_aquatilis_HX2 1
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Shigella_flexneri_2002017 1
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 1
Shigella_boydii_Sb227 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 0
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Escherichia_coli_LY180 1
Escherichia_coli_NA114 0
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_042 2
Escherichia_coli_ABU_83972 0
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_UMN026 1
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_536 0
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_CFT073 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_BW2952 0
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_putida_H8234 2
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 2
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_R124 1
Pseudomonas_mendocina_NK-01 2
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 2
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 2
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 2
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 1
Methylophaga_sp._JAM7 1
Francisella_tularensis_subsp._mediasiatica_FSC147 0
Francisella_tularensis_subsp._holarctica_F92 0
Francisella_tularensis_subsp._holarctica_FTNF002-00 0
Francisella_tularensis_subsp._holarctica_OSU18 0
Francisella_tularensis_subsp._holarctica_LVS 0
Francisella_tularensis_subsp._holarctica_FSC200 0
Francisella_tularensis_subsp._tularensis_TIGB03 0
Francisella_tularensis_subsp._tularensis_TI0902 0
Francisella_tularensis_subsp._tularensis_NE061598 0
Francisella_tularensis_subsp._tularensis_FSC198 0
Francisella_tularensis_subsp._tularensis_SCHU_S4 0
Francisella_cf._novicida_Fx1 0
Pyrococcus_furiosus_DSM_3638 0
Candidatus_Methanomethylophilus_alvus_Mx1201 0
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   2
Rattus_norvegicus_69_3.4   (Norway rat)   2
Mus_musculus_69_38   (House mouse)   2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   2
Ochotona_princeps_69   (American pika)   2
Tupaia_belangeri_69   (Northern tree shrew)   1
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_69_1   (Giant panda)   2
Canis_familiaris_69_3.1   (Dog)   2
Felis_catus_69   (Domestic cat)   2
Equus_caballus_69_2   (Horse)   2
Myotis_lucifugus_69_2.0   (Little brown bat)   2
Pteropus_vampyrus_69_1   (Large flying fox)   3
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   2
Procavia_capensis_69_1   (Cape rock hyrax)   2
Loxodonta_africana_69_3   (African savanna elephant)   2
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2
Macropus_eugenii_69_1.0   (Tammar wallaby)   3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   3
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   2
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2
Arabidopsis_thaliana_10   (Thale cress)   17

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   7
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
Heliconius_numata__(Incomplete) 2
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 1
Encephalitozoon_intestinalis__(endoparasite) 1
Encephalitozoon_cuniculi_(endoparasite) 2
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Lotus_japonicus__(Early_assembly) 12
Malus_x_domestica_(Duplicate)   (Apple)   12
Ricinus_communis__(Early_assembly)   (Castor bean)   13
Nicotiana_benthamiana_0.4.4_(Early_draft) 15
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   10
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   11
Phoenix_dactylifera__(Early_draft)   (Date palm)   6
NCBI_plasmid_sequences_(Plasmids) 24
TargetDB__(Targets) 66
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1
Protozoadb_2010_08_(Protozoadb) 45
STRING_v9.0.5_(STRING) 712
Protein_Data_Bank_(all_PDB_sequenc) 0
Uniprot_2018_03_genome 40572
NCBI_2017_08_genome 26836
UniProt__viral_sequences_(Viral) 0
NCBI_viral_sequences_(Viral) 4

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.