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Domain combinations for _gap_,81901,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81901 - HCP-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   5
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   3
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   4
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   2
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   1
Vicugna_pacos_76_1   (Alpaca)   2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Canis_familiaris_76_3.1   (Dog)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Sorex_araneus_76_1   (European shrew)   2
Erinaceus_europaeus_76   (Western European hedgehog)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Anolis_carolinensis_76_2.0   (Green anole)   2
Latimeria_chalumnae_76_1   (Coelacanth)   3
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   6
Takifugu_rubripes_76_4   (Torafugu)   3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Danio_rerio_76_9   (Zebrafish)   3
Ciona_intestinalis_76   (Vase tunicate)   0
Adineta_vaga 2
Octopus_bimaculoides_280 3
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_willistoni_1.3 0
Drosophila_mojavensis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 1
Sarcoptes_scabiei 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_remanei_ 1
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 1
Echinococcus_granulosus_ 1
Acropora_digitifera_v1.0 0
Amphimedon_queenslandica 0
Trichoplax_adhaerens_ 3
Proterospongia_sp._ATCC_50818_ 7
Monosiga_brevicollis_ 2
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 8
Phycomyces_blakesleeanus_ 3
Rhizopus_oryzae_RA_99-880_ 2
Mucor_circinelloides_ 4
Rhizomucor_miehei_CAU432_ 7
Malassezia_globosa_CBS_7966_ 4
Sporisorium_reilianum_22 3
Ustilago_maydis_ 2
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 2
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 3
Sphaerobolus_stellatus_v1.0 10
Piloderma_croceum_F_1598_v1.0 14
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Hydnomerulius_pinastri_v2.0 7
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 2
Pisolithus_tinctorius_Marx_270_v1.0 2
Scleroderma_citrinum_Foug_A_v1.0 10
Coprinopsis_cinerea_okayama7_130_v3 6
Galerina_marginata_v1.0 8
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 5
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 4
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 3
Sebacina_vermifera_MAFF_305830_v1.0 11
Fomitiporia_mediterranea_v1.0 7
Postia_placenta_ 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 1
Trametes_versicolor_v1.0 2
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 2
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 2
Sporotrichum_thermophile_ATCC_42464_ 2
Thielavia_terrestris_NRRL_8126_ 2
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 1
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 3
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 8
Fusarium_verticillioides_7600_ 4
Trichoderma_atroviride_ 1
Trichoderma_virens_Gv29-8_ 0
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 2
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 2
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2
Cochliobolus_victoriae_FI3_v1.0 2
Cochliobolus_carbonum_26-R-13_v1.0 2
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 2
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 3
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 2
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 2
Aspergillus_versicolor_v1.0 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 2
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 1
Tuber_melanosporum_Mel28_22 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 3
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 2
Ashbya_gossypii_ATCC_10895_ 3
Zygosaccharomyces_rouxii_ 2
Saccharomyces_mikatae_MIT 2
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 1
Schizosaccharomyces_japonicus_yFS275_ 1
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 5
Spizellomyces_punctatus_DAOM_BR117_ 6
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 32
Pinus_taeda   (Loblolly pine)   28
Picea_abies   (Norway spruce)   55
Eucalyptus_grandis_v201   (Rose gum)   43
Theobroma_cacao_B97-61/B2_v1   (Cacao)   41
Gossypium_raimondii_v221 91
Citrus_clementina_v165 55
Citrus_sinensis_v154   (Sweet orange)   46
Thellungiella_halophila_v173 40
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   44
Capsella_rubella_v183 49
Arabidopsis_lyrata_   (Lyrate rockcress)   39
Arabidopsis_thaliana_10   (Thale cress)   47
Carica_papaya_   (Papaya)   26
Medicago_truncatula_   (Barrel medic)   66
Phaseolus_vulgaris_v186   (French bean)   41
Glycine_max_v109   (Soybean)   71
Cucumis_sativus_v122   (Cucumber)   70
Fragaria_vesca_   (Wild strawberry)   42
Malus_domestica_v196   (Apple)   61
Prunus_persica_v139   (Peach)   47
Linum_usitatissimum_v200   (Flax)   53
Manihot_esculenta_v147   (Cassava)   38
Populus_trichocarpa_v156   (Black cottonwood)   54
Vitis_vinifera_   (Wine grape)   37
Mimulus_guttatus_v140   (Spotted monkey flower)   39
Solanum_lycopersicum_v.2.3   (Tomato)   36
Solanum_tuberosum_   (Potato)   62
Actinidia_chinensis_Hongyang_ 45
Aquilegia_coerulea_v195 73
Triticum_urartu_22 26
Triticum_aestivum_22   (Bread wheat)   45
Aegilops_tauschii_22 24
Brachypodium_distachyon_   (Stiff brome)   29
Oryza_barthii_22   (African wild rice)   33
Oryza_meridionalis_22 36
Oryza_glumaepatula_22 58
Oryza_glaberrima   (African rice)   19
Oryza_punctata_22 33
Oryza_nivara_22 42
Oryza_brachyantha_22   (Malo sina)   24
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   38
Oryza_sativa_v193   (Rice)   39
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   26
Panicum_virgatum_v202   (Switchgrass)   59
Setaria_italica_v164   (Foxtail millet)   26
Zea_mays_subsp._mays_   (Maize)   27
Zea_mays_v181   (Maize)   27
Sorghum_bicolor_   (Sorghum)   35
Musa_balbisiana   (Balbis banana)   38
Musa_acuminata_22   (Wild Malaysian banana)   30
Amborella_trichopoda_22 44
Physcomitrella_patens 5
Volvox_carteri_f._nagariensis_ 3
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_tauri_ 2
Bathycoccus_prasinos_ 1
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Porphyridium_purpureum_02_2012 2
Bigelowiella_natans_CCMP2755_22 9
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 4
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 2
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 1
Fragilariopsis_cylindrus 3
Thalassiosira_pseudonana_CCMP1335 1
Paramecium_tetraurelia_ 2
Tetrahymena_thermophila_SB210_1_ 18
Cryptosporidium_hominis 1
Cryptosporidium_muris 1
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 4
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Symbiodinium_minutum_clade_B1_v1.2 7
Naegleria_gruberi_ 5
Trichomonas_vaginalis_ 4
Guillardia_theta_CCMP2712_v1.0_ 2
Emiliania_huxleyi_CCMP1516_ 0
Rivularia_sp._PCC_7116 1
'Nostoc_azollae'_0708 1
Thermobispora_bispora_DSM_43833 1
Catenulispora_acidiphila_DSM_44928 1
Frankia_sp._EAN1pec 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Pseudonocardia_dioxanivorans_CB1190 1
Mycobacterium_avium_104 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Veillonella_parvula_DSM_2008 1
Acidaminococcus_fermentans_DSM_20731 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Ruminococcus_albus_7 0
Desulfotomaculum_acetoxidans_DSM_771 1
Coprococcus_sp._ART55/1 0
Haliscomenobacter_hydrossis_DSM_1100 0
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 0
Flexibacter_litoralis_DSM_6794 1
Candidatus_Amoebophilus_asiaticus_5a2 3
Cyclobacterium_marinum_DSM_745 1
Marivirga_tractuosa_DSM_4126 0
Spirosoma_linguale_DSM_74 0
Parabacteroides_distasonis_ATCC_8503 1
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_sp._CF50 1
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Solitalea_canadensis_DSM_3403 1
Fluviicola_taffensis_DSM_16823 1
Krokinobacter_sp._4H-3-7-5 0
Muricauda_ruestringensis_DSM_13258 0
Cellulophaga_algicola_DSM_14237 1
Capnocytophaga_canimorsus_Cc5 1
Simkania_negevensis_Z 1
Chlamydia_trachomatis_B/Jali20/OT 1
Planctomyces_brasiliensis_DSM_5305 1
Pirellula_staleyi_DSM_6068 1
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1
Brachyspira_hyodysenteriae_WA1 1
Borrelia_afzelii_PKo 1
Deferribacter_desulfuricans_SSM1 1
Thermosipho_melanesiensis_BI429 0
Hydrogenobaculum_sp._Y04AAS1 1
Candidatus_Koribacter_versatilis_Ellin345 1
Candidatus_Nitrospira_defluvii 1
Streptobacillus_moniliformis_DSM_12112 1
Leptotrichia_buccalis_C-1013-b 1
Bacteriovorax_marinus_SJ 1
Helicobacter_bizzozeronii_CIII-1 0
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_felis_ATCC_49179 0
Helicobacter_acinonychis_str._Sheeba 0
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Haliangium_ochraceum_DSM_14365 0
Anaeromyxobacter_sp._Fw109-5 1
Stigmatella_aurantiaca_DW4/3-1 0
beta_proteobacterium_CB 1
Thiomonas_arsenitoxydans 1
Burkholderia_xenovorans_LB400 3
Burkholderia_cenocepacia_HI2424 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Acidovorax_sp._KKS102 1
Collimonas_fungivorans_Ter331 1
Achromobacter_xylosoxidans 1
Sideroxydans_lithotrophicus_ES-1 1
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Magnetococcus_marinus_MC-1 0
Tistrella_mobilis_KA081020-065 1
Candidatus_Puniceispirillum_marinum_IMCC1322 1
Rickettsia_felis_URRWXCal2 1
Rickettsia_montanensis_str._OSU_85-930 1
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 1
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_vitis_S4 1
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 0
Pelagibacterium_halotolerans_B2 1
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_sp._MC1 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 1
Aggregatibacter_aphrophilus_NJ8700 3
Aggregatibacter_actinomycetemcomitans_D7S-1 4
Actinobacillus_succinogenes_130Z 1
Vibrio_anguillarum_775 1
Ferrimonas_balearica_DSM_9799 1
Shewanella_baltica_OS185 1
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_atlantica_T6c 1
Glaciecola_sp._4H-3-7+YE-5 1
Glaciecola_nitratireducens_FR1064 1
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 2
Methylomicrobium_alcaliphilum 1
Methylomonas_methanica_MC09 0
Alkalilimnicola_ehrlichii_MLHE-1 1
Nitrosococcus_halophilus_Nc4 0
Coxiella_burnetii_Dugway_5J108-111 1
Providencia_stuartii_MRSN_2154 0
Yersinia_pseudotuberculosis_IP_31758 1
Yersinia_pestis_Pestoides_F 1
Erwinia_sp._Ejp617 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Pseudomonas_entomophila_L48 1
Pseudomonas_sp._VLB120 1
Methanocella_conradii_HZ254 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 2
Cryptococcus_neoformans_B-3501A_ 2
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 2
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 2
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 2
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_YJM789_ 2
Saccharomyces_cerevisiae_YJM789 2
Saccharomyces_cerevisiae_RM11-1a 2
Saccharomyces_cerevisiae_RM11-1a_ 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Batrachochytrium_dendrobatidis_JEL423_ 3
Batrachochytrium_dendrobatidis_JAM81_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   45
Hordeum_vulgare_22   (Domesticated barley)   111
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   31
Trypanosoma_brucei_Lister_427_v4.1 0
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 2
Anabaena_cylindrica_PCC_7122 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 1
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Amycolatopsis_orientalis_HCCB10007 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_B420 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_animalis_subsp._lactis_AD011 1
Paenibacillus_polymyxa_SC2 1
Nonlabens_dokdonensis_DSW-6 1
Chlamydia_trachomatis_C/TW-3 1
Chlamydia_trachomatis_L2/434/Bu(f) 1
Chlamydia_trachomatis_L2/434/Bu(i) 1
Chlamydia_trachomatis_IU888 1
Chlamydia_trachomatis_IU824 1
Chlamydia_trachomatis_L2b/Canada2 1
Chlamydia_trachomatis_L2b/Canada1 1
Chlamydia_trachomatis_L3/404/LN 1
Chlamydia_trachomatis_L2b/Ams5 1
Chlamydia_trachomatis_L2b/Ams4 1
Chlamydia_trachomatis_L2b/Ams3 1
Chlamydia_trachomatis_L2b/Ams2 1
Chlamydia_trachomatis_L2b/Ams1 1
Chlamydia_trachomatis_L2b/795 1
Chlamydia_trachomatis_L2b/CV204 1
Chlamydia_trachomatis_L2b/LST 1
Chlamydia_trachomatis_L2b/UCH-2 1
Chlamydia_trachomatis_L2b/8200/07 1
Chlamydia_trachomatis_L2/25667R 1
Chlamydia_trachomatis_L1/224 1
Chlamydia_trachomatis_L1/115 1
Chlamydia_trachomatis_L1/440/LN 1
Chlamydia_trachomatis_K/SotonK1 1
Chlamydia_trachomatis_Ia/SotonIa3 1
Chlamydia_trachomatis_Ia/SotonIa1 1
Chlamydia_trachomatis_G/SotonG1 1
Chlamydia_trachomatis_F/SotonF3 1
Chlamydia_trachomatis_F/SW5 1
Chlamydia_trachomatis_F/SW4 1
Chlamydia_trachomatis_E/SotonE8 1
Chlamydia_trachomatis_E/SotonE4 1
Chlamydia_trachomatis_E/SW3 1
Chlamydia_trachomatis_D/SotonD6 1
Chlamydia_trachomatis_D/SotonD5 1
Chlamydia_trachomatis_D/SotonD1 1
Chlamydia_trachomatis_A/5291 1
Chlamydia_trachomatis_A/363 1
Chlamydia_trachomatis_RC-J/971 1
Chlamydia_trachomatis_RC-L2/55 1
Chlamydia_trachomatis_J/6276tet1 2
Chlamydia_trachomatis_RC-J/966 1
Chlamydia_trachomatis_RC-J(s)/122 1
Chlamydia_trachomatis_RC-F(s)/342 2
Chlamydia_trachomatis_RC-L2(s)/3 1
Chlamydia_trachomatis_RC-J/953 1
Chlamydia_trachomatis_RC-J943 1
Chlamydia_trachomatis_RC-Fs852 2
Chlamydia_trachomatis_RC-L2s46 1
Chlamydia_trachomatis_RC-F69 1
Chlamydia_trachomatis_L2c 1
Chlamydia_trachomatis_D-LC 1
Chlamydia_trachomatis_D-EC 1
Chlamydia_trachomatis_G/9301 1
Chlamydia_trachomatis_G/11074 1
Chlamydia_trachomatis_G/11222 1
Chlamydia_trachomatis_G/9768 1
Chlamydia_trachomatis_E/150 1
Chlamydia_trachomatis_E/11023 1
Chlamydia_trachomatis_B/TZ1A828/OT 1
Chlamydia_trachomatis_Sweden2 1
Chlamydia_trachomatis_E/Bour 1
Chlamydia_trachomatis_A2497 1
Chlamydia_trachomatis_A2497 1
Chlamydia_trachomatis_L2b/UCH-1/proctitis 1
Chlamydia_trachomatis_434/Bu 1
Chlamydia_trachomatis_A/HAR-13 1
Chlamydia_trachomatis_D/UW-3/CX 1
Borrelia_afzelii_HLJ01 1
Borrelia_afzelii_PKo 1
Helicobacter_pylori_Gambia94/24 0
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 0
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Hyphomicrobium_denitrificans_1NES1 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 2
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Thalassolituus_oleivorans_MIL-1 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 1
Xylella_fastidiosa_9a5c 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Coxiella_burnetii_RSA_493 1
Proteus_mirabilis_BB2000 0
Yersinia_pseudotuberculosis_PB1/+ 1
Yersinia_pseudotuberculosis_YPIII 1
Yersinia_pseudotuberculosis_IP_32953 1
Yersinia_pestis_biovar_Microtus_str._91001 1
Yersinia_pestis_A1122 1
Yersinia_pestis_Z176003 1
Yersinia_pestis_D182038 1
Yersinia_pestis_D106004 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1
Yersinia_pestis_Nepal516 1
Yersinia_pestis_Antiqua 1
Yersinia_pestis_Angola 1
Yersinia_pestis_CO92 1
Yersinia_pestis_KIM10+ 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Pseudomonas_putida_GB-1 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   1
Vicugna_pacos_69_1   (Alpaca)   2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Canis_familiaris_69_3.1   (Dog)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Sorex_araneus_69_1   (European shrew)   2
Erinaceus_europaeus_69   (Western European hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Latimeria_chalumnae_69_1   (Coelacanth)   2
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   2
Ciona_intestinalis_69   (Vase tunicate)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   44

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   7
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Lotus_japonicus__(Early_assembly) 26
Malus_x_domestica_(Duplicate)   (Apple)   61
Ricinus_communis__(Early_assembly)   (Castor bean)   38
Nicotiana_benthamiana_0.4.4_(Early_draft) 69
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   35
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   36
Phoenix_dactylifera__(Early_draft)   (Date palm)   27
NCBI_plasmid_sequences_(Plasmids) 5
UniProt__viral_sequences_(Viral) 1
Protozoadb_2010_08_(Protozoadb) 19
STRING_v9.0.5_(STRING) 497
Protein_Data_Bank_(all_PDB_sequenc) 0
Uniprot_2018_03_genome 40565
TargetDB__(Targets) 54
NCBI_2017_08_genome 13337
NCBI_viral_sequences_(Viral) 5

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