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Domain combinations for _gap_,82109,82109,_gap_,49899,_gap_,49899,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82109 - MIR domain
82109 - MIR domain
49899 - Concanavalin A-like lectins/glucanases
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Erinaceus_europaeus_76   (Western European hedgehog)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0

Longest transcript per gene
Genome     Number
Erinaceus_europaeus_69   (Western European hedgehog)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
STRING_v9.0.5_(STRING) 0
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 280

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