SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,82153,82153,_gap_,82153,82153,_gap_,57196,82153,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82153 - FAS1 domain
82153 - FAS1 domain
82153 - FAS1 domain
82153 - FAS1 domain
57196 - EGF/Laminin
82153 - FAS1 domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Vicugna_pacos_76_1   (Alpaca)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0

Longest transcript per gene
Genome     Number
Vicugna_pacos_69_1   (Alpaca)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0

Others
Genome     Number
NCBI_2017_08_genome 1

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