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  Home > SCOP hierarchy > Domain combination - _gap_,82671,_gap_,57424,57424,_gap_,50494,57424

Domain combinations for _gap_,82671,_gap_,57424,57424,_gap_,50494,57424 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82671 - SEA domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
50494 - Trypsin-like serine proteases
57424 - LDL receptor-like module

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1

Others
Genome     Number
Uniprot_2018_03_genome 256
NCBI_2017_08_genome 35

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.