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Domain combinations for _gap_,82895,57184,_gap_,82895 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82895 - TSP-1 type 1 repeat
57184 - Growth factor receptor domain
82895 - TSP-1 type 1 repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Bos_taurus_69_3.1   (Cattle)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 168
NCBI_2017_08_genome 41

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