SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,89260,_gap_,89260 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

89260 - Collagen-binding domain
89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Proterospongia_sp._ATCC_50818_ 0
Trichodesmium_erythraeum_IMS101 0
Halothece_sp._PCC_7418 0
Thermincola_potens_JR 0
Haliscomenobacter_hydrossis_DSM_1100 0
Planctomyces_brasiliensis_DSM_5305 0
Treponema_azotonutricium_ZAS-9 1
Candidatus_Solibacter_usitatus_Ellin6076 1

Strains
Genome     Number
Dactylococcopsis_salina_PCC_8305 0
Thioalkalivibrio_nitratireducens_DSM_14787 1

Others
Genome     Number
Uniprot_2018_03_genome 63
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 4

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