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Domain combinations for _gap_,90209,54928 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

90209 - Ran binding protein zinc finger-like
54928 - RNA-binding domain, RBD

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Equus_caballus_76_2   (Horse)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Octopus_bimaculoides_280 0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Thielavia_terrestris_NRRL_8126_ 0
Neurospora_discreta_FGSC_8579_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_wentii_v1.0 0
Aspergillus_niger_22 0
Aspergillus_flavus_NRRL3357_ 0
Malus_domestica_v196   (Apple)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_punctata_22 0
Oryza_nivara_22 0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Ostreococcus_sp._RCC809_ 1
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Leishmania_mexicana_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_congolense_2.4 0
Ectocarpus_siliculosus 0
Albugo_laibachii_22 0
Pythium_ultimum_v1.7-2 1
Symbiodinium_minutum_clade_B1_v1.2 0

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Longest transcript per gene
Genome     Number
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Gadus_morhua_69_1   (Atlantic cod)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
STRING_v9.0.5_(STRING) 0
NCBI_2017_08_genome 0
Uniprot_2018_03_genome 12

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