SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 48452,82199,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like
82199 - SET domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

178 sequences contain the 48452,82199,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Symbiodinium minutum clade B1 v1.2: symbB.v1.2.015273.t1|scaffold1136.1|size135929|1

Paramecium tetraurelia : GSPATP00024000001

Trypanosoma brucei TREU927 v4.1: Tb11.02.2780

Trypanosoma brucei TREU927 v4.1: Tb927.1.4720

Trypanosoma brucei gambiense v4.1: Tbg972.1.3240

Trypanosoma brucei gambiense v4.1: Tbg972.11.5790

Trypanosoma congolense 2.4: psu|TcIL3000.11.5320

Trypanosoma vivax : psu|TvY486_1105290

Trypanosoma vivax : psu|TvY486_0102090

Leishmania braziliensis MHOM/BR/75/M2904 2.4: psu|LbrM24_V2.0400

Leishmania infantum JPCM5 2.4: psu|LinJ24_V3.0400

Leishmania major strain Friedlin : psu|LmjF24.0400

Leishmania mexicana 2.4: psu|LmxM24.0400

Bigelowiella natans CCMP2755 22: JGI_V11_91120

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|205714|fgenesh1_pm.8_#_239

Micromonas sp. RCC299 : jgi|MicpuN2|106237|estExt_fgenesh2_pg.C_Chr_110120

Ostreococcus tauri : jgi|Ostta4|35406|1100010056

Ostreococcus lucimarinus CCE9901 : jgi|Ost9901_3|25206|estExt_fgenesh1_pg.C_Chr_110047

Physcomitrella patens: jgi|Phypa1_1|115197|e_gw1.12.289.1

Amborella trichopoda 22: ERM94553

Amborella trichopoda 22: ERN04677

Musa acuminata 22: GSMUA_Achr6P10780_001

Musa balbisiana: ITC1587_Bchr6_P15737

Sorghum bicolor : jgi|Sorbi1|5030425|Sb01g045950

Zea mays v181: GRMZM2G091916_T01|PACid:20866786

Zea mays subsp. mays : GRMZM2G091916_P01

Setaria italica v164: Si035066m|PACid:19679577

Setaria italica v164: Si039085m|PACid:19682292

Panicum virgatum v202: Pavirv00003829m|PACid:23808419

Phyllostachys heterocyclavar. pubescens: PH01000113G0120

Oryza sativa v193: LOC_Os10g36250.1|PACid:21884534

Oryza sativa v193: LOC_Os03g07260.1|PACid:21914380

Oryza sativa ssp. japonica 5.0: LOC_Os10g36250.1|13110.m03276|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g07260.1|13103.m00809|protein

Oryza nivara 22: ONIVA03G04930.1

Oryza punctata 22: OPUNC03G04840.1

Oryza punctata 22: OPUNC10G13620.1

Oryza punctata 22: OPUNC10G13620.2

Oryza glumaepatula 22: OGLUM03G04990.1

Oryza glumaepatula 22: OGLUM10G15020.1

Oryza meridionalis 22: OMERI10G11770.1

Oryza meridionalis 22: OMERI03G04830.1

Oryza barthii 22: OBART10G15130.1

Brachypodium distachyon : EG:BRADI1G73790.1

Brachypodium distachyon : EG:BRADI3G30360.2

Aquilegia coerulea v195: Aquca_004_00563.1|PACid:22029535

Aquilegia coerulea v195: Aquca_004_00563.2|PACid:22029536

Aquilegia coerulea v195: Aquca_004_00563.3|PACid:22029537

Aquilegia coerulea v195: Aquca_002_00665.1|PACid:22054002

Actinidia chinensis Hongyang : Achn062521

Actinidia chinensis Hongyang : Achn182851

Solanum tuberosum : PGSC0003DMP400032122

Solanum lycopersicum v.2.3: Solyc05g007760.1.1

Mimulus guttatus v140: mgv1a002206m|PACid:17680716

Mimulus guttatus v140: mgv1a019293m|PACid:17687725

Vitis vinifera : GSVIVT01032876001

Vitis vinifera : GSVIVT01012615001

Populus trichocarpa v156: POPTR_0008s08900.1|PACid:18249591

Manihot esculenta v147: cassava4.1_033575m|PACid:17980024

Linum usitatissimum v200: Lus10037155|PACid:23152258

Linum usitatissimum v200: Lus10026202|PACid:23156612

Prunus persica v139: ppa001654m|PACid:17642169

Prunus persica v139: ppa004170m|PACid:17653374

Malus domestica v196: MDP0000231722|PACid:22646423

Malus domestica v196: MDP0000789642|PACid:22644538

Fragaria vesca : gene04715

Fragaria vesca : gene21399

Cucumis sativus v122: Cucsa.284880.1|PACid:16974766

Glycine max v109: Glyma04g40310.1|PACid:16257381

Glycine max v109: Glyma06g14460.1|PACid:16262937

Glycine max v109: Glyma07g35640.1|PACid:16268837

Phaseolus vulgaris v186: Phvulv091023913m|PACid:23539858

Phaseolus vulgaris v186: Phvulv091008015m|PACid:23558809

Medicago truncatula : Medtr4g082140.1

Medicago truncatula : Medtr3g093440.1

Medicago truncatula : Medtr3g093440.2

Arabidopsis thaliana 10: AT1G26760.1

Capsella rubella v183: Carubv10011502m|PACid:20892999

Capsella rubella v183: Carubv10008336m|PACid:20893223

Brassica rapa Chiifu-401 1.2: Bra024688

Thellungiella halophila v173: Thhalv10006832m|PACid:20186587

Thellungiella halophila v173: Thhalv10007288m|PACid:20187537

Citrus sinensis v154: orange1.1g035535m|PACid:18102875

Citrus sinensis v154: orange1.1g048211m|PACid:18130036

Citrus clementina v165: clementine0.9_035295m|PACid:19265874

Citrus clementina v165: clementine0.9_007190m|PACid:19283269

Gossypium raimondii v221: Gorai.013G010300.1|PACid:26789500

Gossypium raimondii v221: Gorai.013G010300.2|PACid:26789501

Gossypium raimondii v221: Gorai.013G010300.3|PACid:26789502

Gossypium raimondii v221: Gorai.013G010300.4|PACid:26789503

Gossypium raimondii v221: Gorai.013G010300.6|PACid:26789504

Gossypium raimondii v221: Gorai.013G010300.7|PACid:26789505

Gossypium raimondii v221: Gorai.013G010300.8|PACid:26789506

Gossypium raimondii v221: Gorai.013G010300.5|PACid:26789507

Gossypium raimondii v221: Gorai.013G087800.1|PACid:26790824

Theobroma cacao B97-61/B2 v1: Tc02_g033010

Theobroma cacao B97-61/B2 v1: Tc10_g016920

Eucalyptus grandis v201: Eucgr.B03207.1|PACid:23568487

Picea abies: MA_10434254g0020

Picea abies: MA_3406g0020

Pinus taeda: PITA_000092659-RA

Pinus taeda: PITA_000053119-RA

Pinus taeda: PITA_000081622-RA

Pinus taeda: PITA_000079319-RA

Selaginella moellendorffii : jgi|Selmo1|403607|fgenesh2_pg.C_scaffold_1000444

Selaginella moellendorffii : jgi|Selmo1|403608|fgenesh2_pg.C_scaffold_1000445

Selaginella moellendorffii : jgi|Selmo1|404768|fgenesh2_pg.C_scaffold_2000756

Selaginella moellendorffii : jgi|Selmo1|422918|fgenesh2_pg.C_scaffold_59000047

Selaginella moellendorffii : jgi|Selmo1|414101|fgenesh2_pg.C_scaffold_22000228

Selaginella moellendorffii : jgi|Selmo1|414102|fgenesh2_pg.C_scaffold_22000229

Selaginella moellendorffii : jgi|Selmo1|415876|fgenesh2_pg.C_scaffold_28000295

Selaginella moellendorffii : jgi|Selmo1|419787|fgenesh2_pg.C_scaffold_44000010

Selaginella moellendorffii : jgi|Selmo1|417136|fgenesh2_pg.C_scaffold_33000146

Dictyostelium purpureum : jgi|Dicpu1|77304|fgeneshDP_pg.C_scaffold_69000028

Dictyostelium purpureum : jgi|Dicpu1|98991|estExt_fgeneshDP_pg.C_2730013

Dictyostelium purpureum : jgi|Dicpu1|89992|fgeneshDP_pm.C_scaffold_375000001

Dictyostelium discoideum: DDB0233544|DDB_G0294595

Dictyostelium discoideum: DDB0214933|DDB_G0270830

Dictyostelium discoideum: DDB0306307|DDB_G0268386

Mycosphaerella graminicola IPO323 : jgi|Mycgr1|37447|fgenesh2_pg.C_scaffold_3000473

Botrytis cinerea B05.10 : BC1T_11856

Amorphotheca resinae v1.0: jgi|Amore1|101670|e_gw1.6.309.1

Trichoderma harzianum CBS 226.95 v1.0: jgi|Triha1|480318|fgenesh1_pg.4_#_397

Trichoderma reesei 1.2: jgi|Trire2|73904|estExt_GeneWisePlus.C_10749

Chaetomium globosum CBS 148.51 : CHGT_05797

Apiospora montagnei NRRL 25634 v1.0: jgi|Apimo1|115033|gm1.12721_g

Dichomitus squalens: jgi|Dicsq1|170202|gm1.5971_g

Fomitiporia mediterranea v1.0: jgi|Fomme1|100608|estExt_Genewise1Plus.C_1_t10442

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|117142|fgenesh1_kg.1_#_268_#_isotig08834

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|151395|gm1.325_g

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|162106|gm1.11036_g

Hebeloma cylindrosporum h7 v2.0: jgi|Hebcy2|119347|CE39087_253

Hebeloma cylindrosporum h7 v2.0: jgi|Hebcy2|30635|gm1.9743_g

Galerina marginata v1.0: jgi|Galma1|133901|gm1.2402_g

Piloderma croceum F 1598 v1.0: jgi|Pilcr1|9862|gm1.9862_g

Piloderma croceum F 1598 v1.0: jgi|Pilcr1|827710|fgenesh1_kg.00083_#_31_#_Locus7915v1rpkm18.41

Hydra vulgaris: gi|449681118|ref|XP_002159729.2|

Echinococcus granulosus : EgrG_000189900.1

Echinococcus multilocularis : EmuJ_000189900.1

Hymenolepis microstoma : HmN_000420700.1

Tetranychus urticae : tetur02g06270

Tetranychus urticae : tetur08g00440

Acyrthosiphon pisum : gi|193657369|ref|XP_001948827.1|

Tribolium castaneum 3.0: TC010888

Tribolium castaneum 3.0: TC005323

Tribolium castaneum 3.0: TC005320

Anopheles gambiae 49_3j: AGAP002999-PA

Culex pipiens quinquefasciatus : CPIJ009352|conserved

Aedes aegypti 55: AAEL001050-PA

Drosophila mojavensis 1.3: FBpp0161550

Drosophila virilis 1.2: FBpp0226641

Drosophila ananassae 1.3: FBpp0128175

Drosophila erecta 1.3: FBpp0132381

Drosophila melanogaster 76_5: FBpp0075717

Drosophila sechellia 1.3: FBpp0206138

Drosophila simulans 1.3: FBpp0211126

Drosophila yakuba 1.3: FBpp0265135

Drosophila persimilis 1.3: FBpp0189067

Drosophila pseudoobscura 2.13: FBpp0274586

Lucilia cuprina: KNC24394

Camponotus floridanus v3.3: Cflo_09007--XP_392262.2_APIME

Atta cephalotes v1.1: AC07892-PA

Atta cephalotes v1.1: AC07748-PA

Acromyrmex echinatior v3.8: Aech_03712

Acromyrmex echinatior v3.8: Aech_06416

Solenopsis invicta v.2.2.3: SI2.2.0_13685

Pogonomyrmex barbatus v1.2: PB17474-RA

Nasonia vitripennis : gi|156545348|ref|XP_001605999.1|

Nasonia vitripennis : gi|156553699|ref|XP_001600173.1|

Heliconius melpomene : HMEL007274-PA

Heliconius melpomene : HMEL010330-PA

Danaus plexippus OGS1.0: DPGLEAN08794-PA

Danaus plexippus OGS1.0: DPGLEAN14035-PA

Capitella sp. I : jgi|Capca1|183922|estExt_Genewise1Plus.C_5630022

Adineta vaga: GSADVT00058599001

Strongylocentrotus purpuratus v3.1: SPU_015540

Xenopus tropicalis 76_4.2: ENSXETP00000029668

Physcomitrella patens subsp. patens 22: PP1S12_184V6.1