SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 49899,_gap_,57603,82895,82895,82895,_gap_,103647,103647,103647,49899 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49899 - Concanavalin A-like lectins/glucanases
57603 - FnI-like domain
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
103647 - TSP type-3 repeat
103647 - TSP type-3 repeat
103647 - TSP type-3 repeat
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

24 sequences contain the 49899,_gap_,57603,82895,82895,82895,_gap_,103647,103647,103647,49899 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Strongylocentrotus purpuratus v3.1: SPU_001638

Danio rerio 76_9: ENSDARP00000102127

Danio rerio 76_9: ENSDARP00000124912

Danio rerio 76_9: ENSDARP00000123303

Danio rerio 76_9: ENSDARP00000079472

Astyanax mexicanus 76: ENSAMXP00000013215

Oreochromis niloticus 76_1.0: ENSONIP00000012323

Poecilia formosa 76: ENSPFOP00000014013

Poecilia formosa 76: ENSPFOP00000017733

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000003231

Oryzias latipes 76_1: ENSORLP00000013449

Gasterosteus aculeatus 76_1: ENSGACP00000007626

Takifugu rubripes 76_4: ENSTRUP00000041840

Takifugu rubripes 76_4: ENSTRUP00000041841

Takifugu rubripes 76_4: ENSTRUP00000046394

Takifugu rubripes 76_4: ENSTRUP00000046395

Tetraodon nigroviridis 76_8: ENSTNIP00000015175

Gadus morhua 76_1: ENSGMOP00000004711

Lepisosteus oculatus 76: ENSLOCP00000020033

Lepisosteus oculatus 76: ENSLOCP00000020034

Latimeria chalumnae 76_1: ENSLACP00000003063

Petromyzon marinus 76_7.0: ENSPMAP00000004478

Canis familiaris 76_3.1: ENSCAFP00000012843

Macaca mulatta 76_1: ENSMMUP00000031109