SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 50729,55961,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
55961 - Bet v1-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

166 sequences contain the 50729,55961,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Pythium irregulare DAOM BR486 22: EPrPI00000021473

Pythium arrhenomanes ATCC 12531 22: EPrPR00000016674

Physcomitrella patens: jgi|Phypa1_1|116893|e_gw1.18.17.1

Physcomitrella patens: jgi|Phypa1_1|105550|estExt_fgenesh1_pm.C_400010

Physcomitrella patens: jgi|Phypa1_1|127779|e_gw1.67.32.1

Physcomitrella patens: jgi|Phypa1_1|132323|e_gw1.95.75.1

Physcomitrella patens: jgi|Phypa1_1|94057|fgenesh1_pg.scaffold_253000022

Physcomitrella patens: jgi|Phypa1_1|196926|estExt_gwp_gw1.C_2790008

Physcomitrella patens: jgi|Phypa1_1|151722|e_gw1.343.9.1

Amborella trichopoda 22: ERN08373

Musa acuminata 22: GSMUA_Achr1P08990_001

Musa acuminata 22: GSMUA_Achr2P00220_001

Musa acuminata 22: GSMUA_Achr4P05670_001

Musa acuminata 22: GSMUA_Achr4P12370_001

Musa acuminata 22: GSMUA_Achr4P18260_001

Musa acuminata 22: GSMUA_Achr5P14640_001

Musa balbisiana: ITC1587_Bchr1_P00824

Musa balbisiana: ITC1587_Bchr2_P02872

Musa balbisiana: ITC1587_Bchr4_P09508

Musa balbisiana: ITC1587_Bchr4_P10339

Sorghum bicolor : jgi|Sorbi1|5028968|Sb01g019140

Sorghum bicolor : jgi|Sorbi1|5058773|Sb07g021510

Sorghum bicolor : jgi|Sorbi1|5061174|Sb10g001380

Zea mays v181: GRMZM2G069976_T01|PACid:20865326

Zea mays v181: GRMZM2G456023_T02|PACid:20824816

Zea mays subsp. mays : GRMZM2G069976_P01

Setaria italica v164: Si005925m|PACid:19703891

Setaria italica v164: Si034357m|PACid:19680882

Setaria italica v164: Si034534m|PACid:19680883

Panicum virgatum v202: Pavirv00038091m|PACid:23786306

Panicum virgatum v202: Pavirv00021196m|PACid:23787820

Phyllostachys heterocyclavar. pubescens: PH01000045G1220

Oryza sativa v193: LOC_Os06g02590.1|PACid:21933862

Oryza sativa ssp. japonica 5.0: LOC_Os06g02590.1|13106.m00190|protein

Oryza brachyantha 22: OB10G20570.1

Oryza nivara 22: ONIVA10G11380.4

Oryza nivara 22: ONIVA10G11380.5

Oryza punctata 22: OPUNC06G01070.1

Oryza punctata 22: OPUNC06G01070.2

Oryza punctata 22: OPUNC06G01070.3

Oryza punctata 22: OPUNC06G01070.4

Oryza punctata 22: OPUNC06G01070.5

Oryza punctata 22: OPUNC10G10390.1

Oryza glaberrima: ORGLA06G0010500.1

Oryza glumaepatula 22: OGLUM10G11870.1

Oryza glumaepatula 22: OGLUM10G11870.2

Oryza meridionalis 22: OMERI10G08750.1

Oryza meridionalis 22: OMERI10G08750.2

Oryza meridionalis 22: OMERI10G09990.1

Oryza meridionalis 22: OMERI10G09990.2

Oryza meridionalis 22: OMERI10G09990.3

Oryza meridionalis 22: OMERI10G09990.4

Oryza barthii 22: OBART10G12110.1

Oryza barthii 22: OBART10G12110.2

Brachypodium distachyon : EG:BRADI3G28937.1

Brachypodium distachyon : EG:BRADI3G28937.2

Brachypodium distachyon : EG:BRADI3G28937.3

Aegilops tauschii 22: EMT33197

Aegilops tauschii 22: EMT14669

Triticum urartu 22: TRIUR3_29071-P1

Triticum urartu 22: TRIUR3_20085-P1

Aquilegia coerulea v195: Aquca_062_00006.1|PACid:22033292

Aquilegia coerulea v195: Aquca_062_00006.2|PACid:22033293

Aquilegia coerulea v195: Aquca_062_00006.3|PACid:22033294

Aquilegia coerulea v195: Aquca_062_00006.4|PACid:22033295

Actinidia chinensis Hongyang : Achn177461

Actinidia chinensis Hongyang : Achn364561

Actinidia chinensis Hongyang : Achn060351

Solanum tuberosum : PGSC0003DMP400032173

Solanum tuberosum : PGSC0003DMP400032174

Solanum tuberosum : PGSC0003DMP400042073

Solanum tuberosum : PGSC0003DMP400042074

Solanum lycopersicum v.2.3: Solyc08g005410.2.1

Solanum lycopersicum v.2.3: Solyc06g075130.2.1

Solanum lycopersicum v.2.3: Solyc11g069530.1.1

Mimulus guttatus v140: mgv1a002168m|PACid:17677275

Vitis vinifera : GSVIVT01025201001

Vitis vinifera : GSVIVT01016264001

Populus trichocarpa v156: POPTR_0009s01640.1|PACid:18228019

Manihot esculenta v147: cassava4.1_002508m|PACid:17968769

Manihot esculenta v147: cassava4.1_032918m|PACid:17967200

Manihot esculenta v147: cassava4.1_002577m|PACid:17972521

Linum usitatissimum v200: Lus10019585|PACid:23142575

Linum usitatissimum v200: Lus10023522|PACid:23160610

Linum usitatissimum v200: Lus10016094|PACid:23171838

Linum usitatissimum v200: Lus10040406|PACid:23173847

Linum usitatissimum v200: Lus10021465|PACid:23179160

Prunus persica v139: ppa002022m|PACid:17645805

Prunus persica v139: ppa001967m|PACid:17648330

Malus domestica v196: MDP0000179930|PACid:22627941

Fragaria vesca : gene16148

Fragaria vesca : gene23278

Cucumis sativus v122: Cucsa.137620.1|PACid:16963226

Glycine max v109: Glyma10g35460.1|PACid:16281050

Glycine max v109: Glyma12g29750.1|PACid:16288330

Glycine max v109: Glyma13g40010.1|PACid:16293231

Phaseolus vulgaris v186: Phvulv091024184m|PACid:23535354

Phaseolus vulgaris v186: Phvulv091002967m|PACid:23539319

Phaseolus vulgaris v186: Phvulv091023233m|PACid:23559041

Medicago truncatula : Medtr1g094890.1

Medicago truncatula : Medtr2g094620.2

Medicago truncatula : Medtr2g094620.3

Medicago truncatula : Medtr2g094620.1

Carica papaya : evm.TU.supercontig_279.2

Arabidopsis thaliana 10: AT4G19040.2

Arabidopsis thaliana 10: AT3G54800.1

Arabidopsis thaliana 10: AT3G54800.2

Arabidopsis thaliana 10: AT2G28320.1

Arabidopsis thaliana 10: AT4G19040.1

Arabidopsis thaliana 10: AT4G19040.3

Arabidopsis lyrata : jgi|Araly1|901677|scaffold_401178.1

Arabidopsis lyrata : jgi|Araly1|485890|fgenesh2_kg.5__1882__AT3G54800.1

Arabidopsis lyrata : jgi|Araly1|492951|fgenesh2_kg.7__2384__AT4G19040.2

Capsella rubella v183: Carubv10018468m|PACid:20888288

Capsella rubella v183: Carubv10022718m|PACid:20903275

Brassica rapa Chiifu-401 1.2: Bra007098

Brassica rapa Chiifu-401 1.2: Bra011959

Brassica rapa Chiifu-401 1.2: Bra013371

Brassica rapa Chiifu-401 1.2: Bra014786

Thellungiella halophila v173: Thhalv10016308m|PACid:20181311

Thellungiella halophila v173: Thhalv10024539m|PACid:20192973

Thellungiella halophila v173: Thhalv10010151m|PACid:20207135

Citrus sinensis v154: orange1.1g004508m|PACid:18097465

Citrus sinensis v154: orange1.1g004608m|PACid:18097466

Citrus sinensis v154: orange1.1g004624m|PACid:18097467

Citrus sinensis v154: orange1.1g004658m|PACid:18097468

Citrus sinensis v154: orange1.1g004783m|PACid:18097469

Citrus sinensis v154: orange1.1g005831m|PACid:18097470

Citrus sinensis v154: orange1.1g004576m|PACid:18120167

Citrus sinensis v154: orange1.1g006638m|PACid:18120168

Citrus clementina v165: clementine0.9_003278m|PACid:19256320

Citrus clementina v165: clementine0.9_003229m|PACid:19282213

Gossypium raimondii v221: Gorai.010G205600.1|PACid:26759337

Gossypium raimondii v221: Gorai.010G205600.2|PACid:26759338

Gossypium raimondii v221: Gorai.009G108000.1|PACid:26762930

Gossypium raimondii v221: Gorai.009G108000.2|PACid:26762931

Gossypium raimondii v221: Gorai.009G108000.3|PACid:26762932

Gossypium raimondii v221: Gorai.009G108000.4|PACid:26762933

Gossypium raimondii v221: Gorai.009G108000.5|PACid:26762934

Gossypium raimondii v221: Gorai.009G313600.1|PACid:26767292

Gossypium raimondii v221: Gorai.004G230200.1|PACid:26775081

Gossypium raimondii v221: Gorai.004G230200.2|PACid:26775082

Gossypium raimondii v221: Gorai.004G230200.3|PACid:26775083

Gossypium raimondii v221: Gorai.004G179600.1|PACid:26775699

Gossypium raimondii v221: Gorai.003G142800.1|PACid:26798091

Gossypium raimondii v221: Gorai.003G186900.1|PACid:26799525

Gossypium raimondii v221: Gorai.003G186900.2|PACid:26799526

Gossypium raimondii v221: Gorai.008G221700.1|PACid:26816492

Theobroma cacao B97-61/B2 v1: Tc03_g030490

Theobroma cacao B97-61/B2 v1: Tc09_g033540

Theobroma cacao B97-61/B2 v1: Tc10_g005630

Eucalyptus grandis v201: Eucgr.G02842.1|PACid:23588592

Eucalyptus grandis v201: Eucgr.B02509.1|PACid:23567672

Eucalyptus grandis v201: Eucgr.B02509.2|PACid:23567673

Eucalyptus grandis v201: Eucgr.E01243.1|PACid:23577964

Pinus taeda: PITA_000041227-RA

Selaginella moellendorffii : jgi|Selmo1|91721|e_gw1.12.595.1

Selaginella moellendorffii : jgi|Selmo1|146206|estExt_Genewise1.C_120071

Selaginella moellendorffii : jgi|Selmo1|74418|e_gw1.0.1595.1

Selaginella moellendorffii : jgi|Selmo1|74959|e_gw1.0.1594.1

Selaginella moellendorffii : jgi|Selmo1|415477|fgenesh2_pg.C_scaffold_27000091

Physcomitrella patens subsp. patens 22: PP1S18_280V6.1

Physcomitrella patens subsp. patens 22: PP1S40_37V6.1

Physcomitrella patens subsp. patens 22: PP1S253_34V6.1

Physcomitrella patens subsp. patens 22: PP1S253_34V6.2

Physcomitrella patens subsp. patens 22: PP1S343_11V6.1