SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 54211,55666,46915,54211,55666,54791,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like
46915 - Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like
54791 - Eukaryotic type KH-domain (KH-domain type I)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Domain combination graphics and links

43 sequences contain the 54211,55666,46915,54211,55666,54791,_gap_ domain architecture in all genomes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.

Nitratifractor salsuginis DSM 16511: gi|319956216|ref|YP_004167479.1|

Candidatus Sulcia muelleri SMDSEM: gi|256370772|ref|YP_003108597.1|

Arthrobacter sp. FB24: gi|116669995|ref|YP_830928.1|

Kocuria rhizophila DC2201: gi|184201241|ref|YP_001855448.1|

[Cellvibrio] gilvus ATCC 13127: gi|336321172|ref|YP_004601140.1|

Cellulomonas fimi ATCC 484: gi|332670053|ref|YP_004453061.1|

Cellulomonas flavigena DSM 20109: gi|296127904|ref|YP_003635154.1|

Isoptericola variabilis 225: gi|334336735|ref|YP_004541887.1|

Intrasporangium calvum DSM 43043: gi|317125320|ref|YP_004099432.1|

Clavibacter michiganensis subsp. michiganensis NCPPB 382: gi|148273228|ref|YP_001222789.1|

Microbacterium testaceum StLB037: gi|323356776|ref|YP_004223172.1|

Leifsonia xyli subsp. xyli str. CTCB07: gi|50954610|ref|YP_061898.1|

Kytococcus sedentarius DSM 20547: gi|256824776|ref|YP_003148736.1|

Sanguibacter keddieii DSM 10542: gi|269795632|ref|YP_003315087.1|

Tropheryma whipplei TW08/27: gi|28572501|ref|NP_789281.1|

Corynebacterium ulcerans 0102: gi|397654245|ref|YP_006494928.1|

Kribbella flavida DSM 17836: gi|284030886|ref|YP_003380817.1|

Streptomyces hygroscopicus subsp. jinggangensis 5008: gi|386842906|ref|YP_006247964.1|

Streptomyces scabiei 87.22: gi|290957009|ref|YP_003488191.1|

Streptomyces cattleya NRRL 8057 = DSM 46488: gi|386358151|ref|YP_006056397.1|

Streptomyces avermitilis MA-4680: gi|29829065|ref|NP_823699.1|

Streptomyces violaceusniger Tu 4113: gi|345009729|ref|YP_004812083.1|

Streptomyces bingchenggensis BCW-1: gi|374986125|ref|YP_004961620.1|

Streptomyces griseus subsp. griseus NBRC 13350: gi|182435576|ref|YP_001823295.1|

Streptomyces sp. SirexAA-E: gi|345002420|ref|YP_004805274.1|

Streptomyces flavogriseus ATCC 33331: gi|357410832|ref|YP_004922568.1|

Streptomyces sp. PAMC26508: gi|479322111|ref|YP_007862162.1|

Kitasatospora setae KM-6054: gi|357392219|ref|YP_004907060.1|

Streptosporangium roseum DSM 43021: gi|271963663|ref|YP_003337859.1|

Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111: gi|297562516|ref|YP_003681490.1|

Thermobifida fusca YX: gi|72161188|ref|YP_288845.1|

Frankia symbiont of Datisca glomerata: gi|336179458|ref|YP_004584833.1|

Catenulispora acidiphila DSM 44928: gi|256396976|ref|YP_003118540.1|

Kineococcus radiotolerans SRS30216: gi|152965434|ref|YP_001361218.1|

Acidothermus cellulolyticus 11B: gi|117928715|ref|YP_873266.1|

Asterochloris sp. Cgr/DA1pho v1.0: jgi|Astpho1|22848|e_gw1.00023.58.1

Glycine max v109: Glyma16g04030.1|PACid:16301399

Caenorhabditis briggsae 2: CBG15142

Brugia malayi WS250: Bm1855

Onchocerca volvulus 22: OVOC2961

Culex pipiens quinquefasciatus : CPIJ005886|polyribonucleotide

Crassostrea gigas 22: EKC40933

Macaca mulatta 76_1: ENSMMUP00000009189