SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 54277,57850,_gap_,46934 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54277 - CAD & PB1 domains
57850 - RING/U-box
46934 - UBA-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

83 sequences contain the 54277,57850,_gap_,46934 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Hydra vulgaris: gi|449665022|ref|XP_004206050.1|

Nematostella vectensis 1.0: jgi|Nemve1|239529|estExt_fgenesh1_pg.C_160036

Mnemiopsis leidyi: ML084433a-PA

Mnemiopsis leidyi: ML084434a-PA

Brugia malayi WS250: Bm2024a

Ixodes scapularis : ISCW015997-PA

Daphnia pulex : jgi|Dappu1|306849|PASA_GEN_5400033

Rhodnius prolixus 22: RPRC007874-PA

Pediculus humanus corporis : vb|PHUM372150-PA|EEB15519.1|Sequestosome-1

Culex pipiens quinquefasciatus : CPIJ012633|conserved

Camponotus floridanus v3.3: Cflo_12062--XP_392222.2_APIME

Atta cephalotes v1.1: AC02989-PA

Acromyrmex echinatior v3.8: Aech_10710

Pogonomyrmex barbatus v1.2: PB19233-RA

Linepithema humile v1.1: LH11952-PA

Harpegnathos saltator v3.3: Hsal_02085--XP_392222.2_APIME

Nasonia vitripennis : gi|156537980|ref|XP_001608187.1|

Bombyx mori : Bmb012727

Capitella sp. I : jgi|Capca1|183889|estExt_Genewise1Plus.C_910048

Helobdella robusta : jgi|Helro1|174776

Crassostrea gigas 22: EKC21311

Octopus bimaculoides 280: Ocbimv22024632m.p

Octopus bimaculoides 280: Ocbimv22024643m.p

Adineta vaga: GSADVT00018818001

Adineta vaga: GSADVT00002183001

Adineta vaga: GSADVT00017210001

Strongylocentrotus purpuratus v3.1: SPU_007251

Danio rerio 76_9: ENSDARP00000117113

Oreochromis niloticus 76_1.0: ENSONIP00000000125

Oreochromis niloticus 76_1.0: ENSONIP00000000126

Poecilia formosa 76: ENSPFOP00000017211

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000015203

Gasterosteus aculeatus 76_1: ENSGACP00000021468

Takifugu rubripes 76_4: ENSTRUP00000044436

Takifugu rubripes 76_4: ENSTRUP00000044437

Takifugu rubripes 76_4: ENSTRUP00000044438

Takifugu rubripes 76_4: ENSTRUP00000044439

Tetraodon nigroviridis 76_8: ENSTNIP00000005606

Gadus morhua 76_1: ENSGMOP00000000511

Lepisosteus oculatus 76: ENSLOCP00000014082

Latimeria chalumnae 76_1: ENSLACP00000013831

Xenopus tropicalis 76_4.2: ENSXETP00000034720

Xenopus laevis : gi|148230116|ref|NP_001079920|

Xenopus laevis : gi|34785115|gb|AAH56852|

Anolis carolinensis 76_2.0: ENSACAP00000021254

Pelodiscus sinensis 76_1.0: ENSPSIP00000010714

Ficedula albicollis 76_1.0: ENSFALP00000008143

Gallus gallus 76_4: ENSGALP00000009486

Meleagris gallopavo 76_2: ENSMGAP00000007267

Petromyzon marinus 76_7.0: ENSPMAP00000003656

Ornithorhynchus anatinus 76_5: ENSOANP00000023386

Monodelphis domestica 76_5: ENSMODP00000004662

Macropus eugenii 76_1.0: ENSMEUP00000011407

Dasypus novemcinctus 76_2: ENSDNOP00000027378

Loxodonta africana 76_3: ENSLAFP00000027151

Loxodonta africana 76_3: ENSLAFP00000023315

Procavia capensis 76_1: ENSPCAP00000002271

Myotis lucifugus 76_2.0: ENSMLUP00000001147

Equus caballus 76_2: ENSECAP00000018502

Felis catus 76_6.2: ENSFCAP00000013637

Ailuropoda melanoleuca 76_1: ENSAMEP00000009220

Mustela putorius furo 76_1.0: ENSMPUP00000000647

Tursiops truncatus 76_1: ENSTTRP00000004172

Ovis aries 76_3.1: ENSOARP00000002847

Bos taurus 76_3.1: ENSBTAP00000020709

Sus scrofa 76_10.2: ENSSSCP00000014903

Ochotona princeps 76: ENSOPRP00000014198

Cavia porcellus 76_3: ENSCPOP00000018515

Ictidomys tridecemlineatus 76_2: ENSSTOP00000012233

Mus musculus 76_38: ENSMUSP00000015981

Mus musculus 76_38: ENSMUSP00000099835

Rattus norvegicus 76_5.0: ENSRNOP00000056021

Rattus norvegicus 76_5.0: ENSRNOP00000004308

Otolemur garnettii 76_3: ENSOGAP00000001924

Callithrix jacchus 76_3.2.1: ENSCJAP00000045935

Macaca mulatta 76_1: ENSMMUP00000027709

Macaca mulatta 76_1: ENSMMUP00000033598

Macaca mulatta 76_1: ENSMMUP00000033595

Papio anubis 76: ENSPANP00000008739

Pongo abelii 76_2: ENSPPYP00000018045

Gorilla gorilla 76_3.1: ENSGGOP00000020182

Pan troglodytes 76_2.1.4: ENSPTRP00000047790

Homo sapiens 76_38: ENSP00000374455