SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,103575,_gap_,53300,69179,_gap_,57196,_gap_,69687,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103575 - Plexin repeat
53300 - vWA-like
69179 - Integrin domains
57196 - EGF/Laminin
69687 - Integrin beta tail domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Domain combination graphics and links

26 sequences contain the _gap_,103575,_gap_,53300,69179,_gap_,57196,_gap_,69687,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.

Daphnia pulex : jgi|Dappu1|196539|estExt_Genewise1Plus.C_230303

Acyrthosiphon pisum : gi|193596476|ref|XP_001949722.1|

Pediculus humanus corporis : vb|PHUM579210-PA|EEB19531.1|myospheroid

Tribolium castaneum 3.0: TC011707

Culex pipiens quinquefasciatus : CPIJ006690|integrin

Culex pipiens quinquefasciatus : CPIJ006947|integrin

Aedes aegypti 55: AAEL012466-PA

Megaselia scalaris 22: MESCA005268-PA

Drosophila mojavensis 1.3: FBpp0164513

Drosophila virilis 1.2: FBpp0231417

Drosophila erecta 1.3: FBpp0138228

Drosophila melanogaster 76_5: FBpp0071061

Drosophila sechellia 1.3: FBpp0192699

Drosophila simulans 1.3: FBpp0215277

Drosophila yakuba 1.3: FBpp0260767

Drosophila suzukii: DS10_00005971

Drosophila pseudoobscura 2.13: FBpp0273502

Drosophila grimshawi 1.3: FBpp0158067

Camponotus floridanus v3.3: Cflo_11603--XP_001123130.1_APIME

Atta cephalotes v1.1: AC11710-PA

Acromyrmex echinatior v3.8: Aech_13392

Solenopsis invicta v.2.2.3: SI2.2.0_04656

Pogonomyrmex barbatus v1.2: PB17723-RA

Linepithema humile v1.1: LH18043-PA

Harpegnathos saltator v3.3: Hsal_09689--XP_001123130.1_APIME

Nasonia vitripennis : gi|156541142|ref|XP_001601489.1|