SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,46689,_gap_,51905,54373,_gap_,47676,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain
47676 - Conserved domain common to transcription factors TFIIS, elongin A, CRSP70

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

42 sequences contain the _gap_,46689,_gap_,51905,54373,_gap_,47676,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Sorghum bicolor : jgi|Sorbi1|5049161|Sb01g030750

Brachypodium distachyon : EG:BRADI3G27750.1

Aegilops tauschii 22: EMT12019

Triticum aestivum 22: Traes_6AL_1B43FE620.2

Triticum aestivum 22: Traes_6BL_8BE7AE308.1

Triticum aestivum 22: Traes_6DL_6D8C330BB.7

Triticum urartu 22: TRIUR3_32275-P1

Populus trichocarpa v156: POPTR_0002s02860.2|PACid:18245271

Manihot esculenta v147: cassava4.1_000066m|PACid:17985057

Prunus persica v139: ppa000083m|PACid:17652147

Malus domestica v196: MDP0000306147|PACid:22679041

Fragaria vesca : gene15221

Glycine max v109: Glyma14g40610.1|PACid:16297077

Glycine max v109: Glyma17g37470.1|PACid:16307348

Phaseolus vulgaris v186: Phvulv091010813m|PACid:23549045

Phaseolus vulgaris v186: Phvulv091010814m|PACid:23549046

Medicago truncatula : Medtr1g023510.1

Medicago truncatula : Medtr1g023510.2

Medicago truncatula : Medtr1g023510.3

Medicago truncatula : Medtr1g023510.4

Medicago truncatula : Medtr1g023510.5

Medicago truncatula : Medtr1g023510.6

Medicago truncatula : Medtr3g113170.1

Medicago truncatula : Medtr3g113170.2

Arabidopsis thaliana 10: AT4G16310.1

Arabidopsis lyrata : jgi|Araly1|493254|fgenesh2_kg.7__2687__AT4G16310.1

Capsella rubella v183: Carubv10003981m|PACid:20896677

Brassica rapa Chiifu-401 1.2: Bra040571

Thellungiella halophila v173: Thhalv10024204m|PACid:20196105

Citrus sinensis v154: orange1.1g046008m|PACid:18092216

Citrus clementina v165: clementine0.9_000091m|PACid:19269684

Citrus clementina v165: clementine0.9_000092m|PACid:19269685

Gossypium raimondii v221: Gorai.005G110900.1|PACid:26803706

Gossypium raimondii v221: Gorai.005G110900.2|PACid:26803707

Gossypium raimondii v221: Gorai.005G110900.3|PACid:26803705

Gossypium raimondii v221: Gorai.012G046900.1|PACid:26825402

Gossypium raimondii v221: Gorai.012G046900.2|PACid:26825401

Gossypium raimondii v221: Gorai.012G046900.3|PACid:26825400

Gossypium raimondii v221: Gorai.012G046900.4|PACid:26825403

Gossypium raimondii v221: Gorai.012G046900.5|PACid:26825404

Picea abies: MA_120420g0020

Physcomitrella patens subsp. patens 22: PP1S38_399V6.1