SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47353,109640,_gap_,57667,57667,57667,57667,57667,57667,57667,57667 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47353 - Retrovirus capsid dimerization domain-like
109640 - KRAB domain (Kruppel-associated box)
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

27 sequences contain the _gap_,47353,109640,_gap_,57667,57667,57667,57667,57667,57667,57667,57667 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Monodelphis domestica 76_5: ENSMODP00000024150

Sarcophilus harrisii 76_7.0: ENSSHAP00000002165

Sarcophilus harrisii 76_7.0: ENSSHAP00000015308

Dasypus novemcinctus 76_2: ENSDNOP00000013091

Echinops telfairi 76: ENSETEP00000007062

Loxodonta africana 76_3: ENSLAFP00000013858

Procavia capensis 76_1: ENSPCAP00000002971

Myotis lucifugus 76_2.0: ENSMLUP00000011200

Equus caballus 76_2: ENSECAP00000000076

Canis familiaris 76_3.1: ENSCAFP00000004450

Canis familiaris 76_3.1: ENSCAFP00000026601

Mustela putorius furo 76_1.0: ENSMPUP00000010041

Tursiops truncatus 76_1: ENSTTRP00000005534

Ovis aries 76_3.1: ENSOARP00000018089

Sus scrofa 76_10.2: ENSSSCP00000019106

Tupaia belangeri 76: ENSTBEP00000008175

Heterocephalus glaber v1.7-2: HGL_H00000379168-1

Ictidomys tridecemlineatus 76_2: ENSSTOP00000013638

Mus musculus 76_38: ENSMUSP00000114531

Mus musculus 76_38: ENSMUSP00000141046

Rattus norvegicus 76_5.0: ENSRNOP00000004291

Callithrix jacchus 76_3.2.1: ENSCJAP00000021927

Macaca mulatta 76_1: ENSMMUP00000021980

Nomascus leucogenys 76_1.0: ENSNLEP00000017873

Pongo abelii 76_2: ENSPPYP00000009020

Homo sapiens 76_38: ENSP00000379168

Homo sapiens 76_38: ENSP00000379169