SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47353,_gap_,109640 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47353 - Retrovirus capsid dimerization domain-like
109640 - KRAB domain (Kruppel-associated box)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Domain combination graphics and links

39 sequences contain the _gap_,47353,_gap_,109640 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.

Anolis carolinensis 76_2.0: ENSACAP00000021054

Monodelphis domestica 76_5: ENSMODP00000027490

Sarcophilus harrisii 76_7.0: ENSSHAP00000002977

Sarcophilus harrisii 76_7.0: ENSSHAP00000003165

Sarcophilus harrisii 76_7.0: ENSSHAP00000003236

Myotis lucifugus 76_2.0: ENSMLUP00000010288

Myotis lucifugus 76_2.0: ENSMLUP00000021019

Felis catus 76_6.2: ENSFCAP00000025450

Felis catus 76_6.2: ENSFCAP00000009986

Canis familiaris 76_3.1: ENSCAFP00000006578

Canis familiaris 76_3.1: ENSCAFP00000030355

Ailuropoda melanoleuca 76_1: ENSAMEP00000011827

Vicugna pacos 76_1: ENSVPAP00000002606

Ovis aries 76_3.1: ENSOARP00000004150

Sus scrofa 76_10.2: ENSSSCP00000001270

Tupaia belangeri 76: ENSTBEP00000012072

Oryctolagus cuniculus 76_2: ENSOCUP00000005922

Cavia porcellus 76_3: ENSCPOP00000008777

Ictidomys tridecemlineatus 76_2: ENSSTOP00000003984

Ictidomys tridecemlineatus 76_2: ENSSTOP00000016232

Mus musculus 76_38: ENSMUSP00000112862

Mus musculus 76_38: ENSMUSP00000112134

Mus musculus 76_38: ENSMUSP00000132131

Rattus norvegicus 76_5.0: ENSRNOP00000057718

Callithrix jacchus 76_3.2.1: ENSCJAP00000044081

Macaca mulatta 76_1: ENSMMUP00000015665

Macaca mulatta 76_1: ENSMMUP00000015662

Nomascus leucogenys 76_1.0: ENSNLEP00000011686

Tarsius syrichta 76_1: ENSTSYP00000003105

Tarsius syrichta 76_1: ENSTSYP00000007684

Pongo abelii 76_2: ENSPPYP00000015617

Pongo abelii 76_2: ENSPPYP00000007962

Gorilla gorilla 76_3.1: ENSGGOP00000010678

Gorilla gorilla 76_3.1: ENSGGOP00000024971

Homo sapiens 76_38: ENSP00000483454

Homo sapiens 76_38: ENSP00000345404

Homo sapiens 76_38: ENSP00000416681

Homo sapiens 76_38: ENSP00000373250

Homo sapiens 76_38: ENSP00000373251