SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,48371,47769,47769,52200,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
47769 - SAM/Pointed domain
47769 - SAM/Pointed domain
52200 - Toll/Interleukin receptor TIR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

36 sequences contain the _gap_,48371,47769,47769,52200,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Trichinella spiralis 22: EFV62202

Caenorhabditis elegans 76_235: F13B10.1c

Caenorhabditis elegans 76_235: F13B10.1a

Caenorhabditis remanei : CRE13280

Caenorhabditis brenneri : CBN09654

Brugia malayi WS250: Bm3330d

Brugia malayi WS250: Bm3330e

Onchocerca volvulus 22: OVOC8299

Meloidogyne incognita : gnl|MincDB|prot:Minc07881

Ixodes scapularis : ISCW010552-PA

Sarcoptes scabiei: SSCA003373-PA

Acyrthosiphon pisum : gi|193652592|ref|XP_001947541.1|

Tribolium castaneum 3.0: TC012668

Aedes aegypti 55: AAEL014931-PB

Drosophila mojavensis 1.3: FBpp0162369

Drosophila virilis 1.2: FBpp0226343

Drosophila erecta 1.3: FBpp0133013

Drosophila melanogaster 76_5: FBpp0293532

Drosophila melanogaster 76_5: FBpp0293531

Drosophila melanogaster 76_5: FBpp0293530

Drosophila melanogaster 76_5: FBpp0293533

Drosophila melanogaster 76_5: FBpp0293534

Drosophila melanogaster 76_5: FBpp0293535

Drosophila melanogaster 76_5: FBpp0293536

Drosophila melanogaster 76_5: FBpp0306073

Drosophila sechellia 1.3: FBpp0206492

Drosophila simulans 1.3: FBpp0212452

Drosophila yakuba 1.3: FBpp0266664

Drosophila pseudoobscura 2.13: FBpp0286996

Drosophila willistoni 1.3: FBpp0249078

Drosophila grimshawi 1.3: FBpp0148895

Lucilia cuprina: KNC22101

Camponotus floridanus v3.3: Cflo_08329--XP_394430.3_APIME

Acromyrmex echinatior v3.8: Aech_17648

Harpegnathos saltator v3.3: Hsal_08155--XP_394430.3_APIME

Bombyx mori : Bmb035599