SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,49313,111006,_gap_,49313,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49313 - Cadherin-like
111006 - Dystroglycan, domain 2
49313 - Cadherin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

83 sequences contain the _gap_,49313,111006,_gap_,49313,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Lottia gigantea : jgi|Lotgi1|224800|estExt_Genewise1Plus.C_sca_1240051

Octopus bimaculoides 280: Ocbimv22032669m.p

Strongylocentrotus purpuratus v3.1: SPU_028775

Danio rerio 76_9: ENSDARP00000020759

Danio rerio 76_9: ENSDARP00000106371

Astyanax mexicanus 76: ENSAMXP00000015319

Oreochromis niloticus 76_1.0: ENSONIP00000021921

Oreochromis niloticus 76_1.0: ENSONIP00000023354

Poecilia formosa 76: ENSPFOP00000002957

Poecilia formosa 76: ENSPFOP00000009324

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000015739

Oryzias latipes 76_1: ENSORLP00000012390

Gasterosteus aculeatus 76_1: ENSGACP00000003480

Takifugu rubripes 76_4: ENSTRUP00000005991

Takifugu rubripes 76_4: ENSTRUP00000005992

Takifugu rubripes 76_4: ENSTRUP00000018145

Takifugu rubripes 76_4: ENSTRUP00000018146

Tetraodon nigroviridis 76_8: ENSTNIP00000021045

Gadus morhua 76_1: ENSGMOP00000019125

Lepisosteus oculatus 76: ENSLOCP00000016515

Latimeria chalumnae 76_1: ENSLACP00000016172

Xenopus tropicalis 76_4.2: ENSXETP00000013038

Xenopus laevis : gi|148232832|ref|NP_001082480|

Xenopus laevis : gi|49115606|gb|AAH73500|

Xenopus laevis : gi|148232988|ref|NP_001080755|

Xenopus laevis : gi|28278291|gb|AAH46260|

Xenopus laevis : gi|28300301|gb|AAO37766|

Xenopus laevis : gi|22450128|gb|CAD42882|

Anolis carolinensis 76_2.0: ENSACAP00000023254

Anolis carolinensis 76_2.0: ENSACAP00000007094

Pelodiscus sinensis 76_1.0: ENSPSIP00000018967

Ficedula albicollis 76_1.0: ENSFALP00000009394

Taeniopygia guttata 76_3.2.4: ENSTGUP00000005324

Anas platyrhynchos 76_1.0: ENSAPLP00000004674

Gallus gallus 76_4: ENSGALP00000041404

Meleagris gallopavo 76_2: ENSMGAP00000002906

Saccoglossus kowalevskii v3.0: Sakowv30014894m

Ornithorhynchus anatinus 76_5: ENSOANP00000021010

Monodelphis domestica 76_5: ENSMODP00000016221

Sarcophilus harrisii 76_7.0: ENSSHAP00000019871

Sarcophilus harrisii 76_7.0: ENSSHAP00000019872

Macropus eugenii 76_1.0: ENSMEUP00000000989

Dasypus novemcinctus 76_2: ENSDNOP00000013106

Echinops telfairi 76: ENSETEP00000014771

Loxodonta africana 76_3: ENSLAFP00000009234

Procavia capensis 76_1: ENSPCAP00000009970

Erinaceus europaeus 76: ENSEEUP00000008711

Pteropus vampyrus 76_1: ENSPVAP00000008254

Equus caballus 76_2: ENSECAP00000007588

Felis catus 76_6.2: ENSFCAP00000024727

Canis familiaris 76_3.1: ENSCAFP00000016488

Ailuropoda melanoleuca 76_1: ENSAMEP00000013193

Mustela putorius furo 76_1.0: ENSMPUP00000013704

Tursiops truncatus 76_1: ENSTTRP00000002571

Ovis aries 76_3.1: ENSOARP00000014632

Bos taurus 76_3.1: ENSBTAP00000015385

Sus scrofa 76_10.2: ENSSSCP00000021948

Ochotona princeps 76: ENSOPRP00000011727

Oryctolagus cuniculus 76_2: ENSOCUP00000002981

Cavia porcellus 76_3: ENSCPOP00000007095

Heterocephalus glaber v1.7-2: HGL_H00000312435

Ictidomys tridecemlineatus 76_2: ENSSTOP00000019924

Dipodomys ordii 76_1: ENSDORP00000007034

Mus musculus 76_38: ENSMUSP00000079294

Mus musculus 76_38: ENSMUSP00000128531

Mus musculus 76_38: ENSMUSP00000130626

Rattus norvegicus 76_5.0: ENSRNOP00000026327

Microcebus murinus 76_1: ENSMICP00000009666

Otolemur garnettii 76_3: ENSOGAP00000013297

Callithrix jacchus 76_3.2.1: ENSCJAP00000007268

Macaca mulatta 76_1: ENSMMUP00000006224

Papio anubis 76: ENSPANP00000002986

Nomascus leucogenys 76_1.0: ENSNLEP00000008344

Nomascus leucogenys 76_1.0: ENSNLEP00000023336

Tarsius syrichta 76_1: ENSTSYP00000006053

Gorilla gorilla 76_3.1: ENSGGOP00000011601

Pan troglodytes 76_2.1.4: ENSPTRP00000025763

Homo sapiens 76_38: ENSP00000312435

Homo sapiens 76_38: ENSP00000438421

Homo sapiens 76_38: ENSP00000439334

Homo sapiens 76_38: ENSP00000440590

Homo sapiens 76_38: ENSP00000440705

Homo sapiens 76_38: ENSP00000442600