SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,49899,54928 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49899 - Concanavalin A-like lectins/glucanases
54928 - RNA-binding domain, RBD

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

13 sequences contain the _gap_,49899,54928 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Thalassiosira pseudonana CCMP1335: jgi|Thaps3|8768|fgenesh1_pg.C_chr_11a000154

Fragilariopsis cylindrus: jgi|Fracy1|246623|fgenesh2_pg.18_#_196

Fragilariopsis cylindrus: jgi|Fracy1|248833|fgenesh2_pg.25_#_1

Phaeodactylum tricornutumCCAP 1055/1: jgi|Phatr2|50292|estExt_fgenesh1_pg.C_chr_280094

Hyaloperonospora arabidopsidis 22: HpaP806325

Phytophthora infestans T30-4 : PITG_02330

Phytophthora sojae 1.1: jgi|Physo1_1|129281|estExt_fgenesh1_pg.C_70106

Phytophthora ramorum 1.1: jgi|Phyra1_1|75647|fgenesh1_pg.C_scaffold_14000009

Pythium irregulare DAOM BR486 22: EPrPI00000021370

Pythium aphanidermatum DAOM BR444 22: EPrPA00000023367

Pythium ultimum v1.7-2: PYU1_T011909

Pythium arrhenomanes ATCC 12531 22: EPrPR00000017628

Ectocarpus siliculosus: Esi0133_0063