SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,50729,54236,48350,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
54236 - Ubiquitin-like
48350 - GTPase activation domain, GAP

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

34 sequences contain the _gap_,50729,54236,48350,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Acyrthosiphon pisum : gi|193711489|ref|XP_001952799.1|

Danio rerio 76_9: ENSDARP00000112111

Oreochromis niloticus 76_1.0: ENSONIP00000015114

Oreochromis niloticus 76_1.0: ENSONIP00000019820

Poecilia formosa 76: ENSPFOP00000007398

Lepisosteus oculatus 76: ENSLOCP00000013184

Xenopus tropicalis 76_4.2: ENSXETP00000055241

Xenopus tropicalis 76_4.2: ENSXETP00000030455

Anolis carolinensis 76_2.0: ENSACAP00000001302

Pelodiscus sinensis 76_1.0: ENSPSIP00000010712

Pelodiscus sinensis 76_1.0: ENSPSIP00000015386

Ficedula albicollis 76_1.0: ENSFALP00000009146

Gallus gallus 76_4: ENSGALP00000027647

Monodelphis domestica 76_5: ENSMODP00000034090

Macropus eugenii 76_1.0: ENSMEUP00000005956

Choloepus hoffmanni 76_1: ENSCHOP00000004421

Procavia capensis 76_1: ENSPCAP00000013980

Pteropus vampyrus 76_1: ENSPVAP00000001771

Equus caballus 76_2: ENSECAP00000017514

Mustela putorius furo 76_1.0: ENSMPUP00000003318

Tursiops truncatus 76_1: ENSTTRP00000014615

Vicugna pacos 76_1: ENSVPAP00000002886

Oryctolagus cuniculus 76_2: ENSOCUP00000011991

Heterocephalus glaber v1.7-2: HGL_H00000260283

Mus musculus 76_38: ENSMUSP00000065633

Rattus norvegicus 76_5.0: ENSRNOP00000034071

Otolemur garnettii 76_3: ENSOGAP00000014269

Callithrix jacchus 76_3.2.1: ENSCJAP00000046495

Macaca mulatta 76_1: ENSMMUP00000036716

Papio anubis 76: ENSPANP00000010602

Nomascus leucogenys 76_1.0: ENSNLEP00000008843

Pongo abelii 76_2: ENSPPYP00000004414

Pan troglodytes 76_2.1.4: ENSPTRP00000007329

Homo sapiens 76_38: ENSP00000260283