SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,52833,_gap_,54236,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52833 - Thioredoxin-like
54236 - Ubiquitin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

49 sequences contain the _gap_,52833,_gap_,54236,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Cyanidioschyzon merolae: gnl|CMER|CML244C

Cyanidioschyzon merolae strain 10D 22: CML244CT

Panicum virgatum v202: Pavirv00010677m|PACid:23788845

Oryza nivara 22: ONIVA02G27980.4

Oryza nivara 22: ONIVA02G27980.5

Oryza glumaepatula 22: OGLUM02G26060.5

Oryza glumaepatula 22: OGLUM02G26060.6

Brachypodium distachyon : EG:BRADI4G20210.1

Aegilops tauschii 22: EMT01048

Theobroma cacao B97-61/B2 v1: Tc04_g018700

Catenaria anguillulae PL171 v1.0: jgi|Catan1|58581|gm1.11798_g

Schizosaccharomyces japonicus yFS275 : SJAG_01585T0

Lachancea kluyveri : gnl|GLV|SAKL0G05280g

Debaromyces hansenii: gnl|GLV|DEHA2G16852g

Candida guilliermondii ATCC 6260 : PGUT_04527

Lodderomyces elongisporus NRRL YB-4239 : LELT_04547

Candida albicans SC5314: CA0295

Candida dubliniensis CD36 : Cd36_43640

Paracoccidioides brasiliensis Pb18 : PADG_06732T0

Trametes versicolor v1.0: jgi|Trave1|60129|estExt_fgenesh1_pm.C_9_t10441

Dichomitus squalens: jgi|Dicsq1|169986|gm1.5755_g

Fomitopsis pinicola FP-58527 SS1 v3.0: jgi|Fompi3|110679|Fompi1.fgenesh1_pg.2_#_288

Fomitopsis pinicolav1.0: jgi|Fompi1|110679|fgenesh1_pg.2_#_288

Fomitiporia mediterranea v1.0: jgi|Fomme1|157464|gm1.7794_g

Sebacina vermifera MAFF 305830 v1.0: jgi|Sebve1|331551|fgenesh1_kg.43_#_47_#_Locus6390v1rpkm19.79

Punctularia strigosozonata v1.0: jgi|Punst1|88916|estExt_Genewise1.C_8_t30168

Heterobasidion annosum : jgi|Hetan1|39466|estExt_Genewise1.C_130339

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|69114|e_gw1.24.6.1

Schizophyllum commune : jgi|Schco1|105420|augustus-scaffold_2.g653

Agaricus bisporus var. bisporus : jgi|Agabi_varbisH97_2|195348|estExt_fgenesh2_kg.C_120095

Laccaria bicolor S238N-H82 : jgi|Lacbi1|312756|eu2.Lbscf0054g00810

Galerina marginata v1.0: jgi|Galma1|242958|fgenesh1_kg.7_#_2_#_Locus796v1rpkm155.38

Amanita muscaria Koide v1.0: jgi|Amamu1|186568|fgenesh1_pm.24_#_5

Amanita thiersii Skay4041 v1.0: jgi|Amath1|5669|gm1.5669_g

Coprinopsis cinerea okayama7 130 v3: CC1G_09900T0

Scleroderma citrinum Foug A v1.0: jgi|Sclci1|237095|CE90480_11138

Pisolithus tinctorius Marx 270 v1.0: jgi|Pisti1|20257|gm1.2876_g

Pisolithus microcarpus 441 v1.0: jgi|Pismi1|28570|fgenesh1_pm.19_#_32

Paxillus rubicundulus Ve08.2h10 v1.0: jgi|Paxru1|833398|fgenesh1_kg.1144_#_2_#_Locus2666v1rpkm64.36

Hydnomerulius pinastri v2.0: jgi|Hydpi2|116756|fgenesh1_kg.35_#_2_#_Locus4302v1rpkm56.34

Coniophora puteana: jgi|Conpu1|147050|estExt_fgenesh1_pg.C_150185

Serpula lacrymans var. lacrymans S7.9 : jgi|Serla_S7_9|450489|estExt_fgenesh2_pm.C_90039

Sphaerobolus stellatus v1.0: jgi|Sphst1|239543|gm1.1433_g

Rhodotorula graminis WP1 v1.0: jgi|Rhoba1_1|55776|estExt_Genemark1.C_140212

Puccinia graminis f. sp. tritici CRL 75-36-700-3 : PGTT_19124

Cronartium quercuum f. sp. fusiforme G11 v1.0: jgi|Croqu1|108234|estExt_Genemark1.C_800052

Sporisorium reilianum 22: CBQ73046

Schistosoma mansoni : Smp_084610

Drosophila suzukii: DS10_00001204