SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54791,_gap_,54791,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

166 sequences contain the _gap_,54791,_gap_,54791,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Guillardia theta CCMP2712 v1.0 : jgi|Guith1|133904|fgenesh2_pg.9_#_126

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.028802.t1|scaffold3088.1|size63905|2

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.028802.t2|scaffold3088.1|size63905|2

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.030624.t1|scaffold3472.1|size76643|5

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.032865.t1|scaffold3954.1|size49683|4

Neospora caninum: psu|NCLIV_003620

Tetrahymena thermophila SB210 1 : 3824.m02905

Paramecium tetraurelia : GSPATP00030515001

Paramecium tetraurelia : GSPATP00009329001

Paramecium tetraurelia : GSPATP00002598001

Paramecium tetraurelia : GSPATP00019821001

Perkinsus marinus ATCC 50983 : gi|294948288|ref|XP_002785688.1|

Perkinsus marinus ATCC 50983 : gi|294954873|ref|XP_002788337.1|

Perkinsus marinus ATCC 50983 : gi|294910790|ref|XP_002777948.1|

Perkinsus marinus ATCC 50983 : gi|294890721|ref|XP_002773281.1|

Thalassiosira pseudonana CCMP1335: jgi|Thaps3|6068|fgenesh1_pg.C_chr_6000223

Thalassiosira pseudonana CCMP1335: jgi|Thaps3_bd|1798|estExt_fgenesh1_pg.C_bd_8x510016

Fragilariopsis cylindrus: jgi|Fracy1|242061|fgenesh2_pg.9_#_535

Fragilariopsis cylindrus: jgi|Fracy1|256363|fgenesh2_pg.75_#_54

Ectocarpus siliculosus: Esi0256_0041

Bigelowiella natans CCMP2755 22: JGI_V11_84152

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|40057|MicpuC2.fgenesh1_pg.C_scaffold_6000034

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|189698|gm1.6819_g

Micromonas sp. RCC299 : jgi|MicpuN2|52109|est_orfs.Chr_03_1980_3201575:1

Micromonas sp. RCC299 : jgi|MicpuN2|99702|fgenesh2_pg.C_Chr_03000483

Bathycoccus prasinos : Bathy09g01650

Ostreococcus tauri : jgi|Ostta4|37647|1800010051

Chlamydomonas reinhardtii 4.0: jgi|Chlre4|408879|pasa_Sanger_mRNA16315

Volvox carteri v199: Vocar20003271m|PACid:23135934

Volvox carteri f. nagariensis : jgi|Volca1|105091|estExt_fgenesh4_pg.C_230137

Sorghum bicolor : jgi|Sorbi1|5037470|Sb04g002170

Setaria italica v164: Si020073m|PACid:19688402

Panicum virgatum v202: Pavirv00014737m|PACid:23762982

Panicum virgatum v202: Pavirv00017783m|PACid:23787319

Panicum virgatum v202: Pavirv00017784m|PACid:23787320

Oryza glumaepatula 22: OGLUM12G19460.1

Oryza meridionalis 22: OMERI12G12430.1

Triticum aestivum 22: Traes_1BL_E233C5D1F.1

Solanum tuberosum : PGSC0003DMP400034566

Solanum lycopersicum v.2.3: Solyc01g097010.2.1

Vitis vinifera : GSVIVT01029319001

Manihot esculenta v147: cassava4.1_006668m|PACid:17989409

Manihot esculenta v147: cassava4.1_009969m|PACid:17963550

Brassica rapa Chiifu-401 1.2: Bra019133

Pinus taeda: PITA_000078194-RA

Schizosaccharomyces pombe: SPAC30D11.14c

Schizosaccharomyces japonicus yFS275 : SJAG_02083T0

Schizosaccharomyces cryophilus OY26 22: EPY50813

Wickerhamomyces anomalus: jgi|Wican1|98481|estExt_fgenesh1_pm.C_1_t10177

Babjeviella inositovora NRRL Y-12698 v1.0: jgi|Babin1|137865|CE69544_3001

Candida dubliniensis CD36 : Cd36_85270

Tuber melanosporum Vittad : GSTUMT00005858001

Tuber melanosporum Mel28 22: CAZ82193

Botrytis cinerea B05.10 : BC1T_05002

Cryphonectria parasitica : jgi|Crypa1|90135|estExt_Genewise1Plus.C_31637

Chaetomium globosum CBS 148.51 : CHGT_04805

Thielavia terrestris NRRL 8126 : jgi|Thite1|66353|estExt_Genewise1Plus.C_10898

Sporotrichum thermophile ATCC 42464 : jgi|Spoth1|37261|e_gw1.1.3735.1

Dichomitus squalens: jgi|Dicsq1|173458|gm1.9227_g

Rhizopus oryzae RA 99-880 : RO3T_09441

Phycomyces blakesleeanus : jgi|Phybl1|67978|fgeneshPB_pg.21__30

Schistosoma mansoni : Smp_127620

Schistosoma mansoni : Smp_032280

Schistosoma mansoni : Smp_163680

Taenia solium : TsM_000102600;OldName=augustus_7419

Echinococcus granulosus : EgrG_000495700.1

Echinococcus multilocularis : EmuJ_000495700.1

Hymenolepis microstoma : HmN_000437200.1

Caenorhabditis japonica : CJA04620

Brugia malayi WS250: Bm9726a

Meloidogyne hapla : MhA1_Contig261.frz3.gene41

Meloidogyne incognita : gnl|MincDB|prot:Minc15349

Meloidogyne incognita : gnl|MincDB|prot:Minc11315

Sarcoptes scabiei: SSCA002649-PA

Rhodnius prolixus 22: RPRC001613-PA

Culex pipiens quinquefasciatus : CPIJ002909|far

Aedes aegypti 55: AAEL010153-PA

Drosophila virilis 1.2: FBpp0232468

Drosophila virilis 1.2: FBpp0230322

Drosophila suzukii: DS10_00002091

Capitella sp. I : jgi|Capca1|119585|e_gw1.376.28.1

Lottia gigantea : jgi|Lotgi1|232362|estExt_fgenesh2_pg.C_sca_280115

Octopus bimaculoides 280: Ocbimv22005467m.p

Octopus bimaculoides 280: Ocbimv22005468m.p

Octopus bimaculoides 280: Ocbimv22005469m.p

Octopus bimaculoides 280: Ocbimv22005470m.p

Octopus bimaculoides 280: Ocbimv22005471m.p

Octopus bimaculoides 280: Ocbimv22005472m.p

Strongylocentrotus purpuratus v3.1: SPU_006433

Strongylocentrotus purpuratus v3.1: SPU_006872

Astyanax mexicanus 76: ENSAMXP00000001195

Astyanax mexicanus 76: ENSAMXP00000012054

Oreochromis niloticus 76_1.0: ENSONIP00000000265

Oreochromis niloticus 76_1.0: ENSONIP00000008178

Oreochromis niloticus 76_1.0: ENSONIP00000008179

Poecilia formosa 76: ENSPFOP00000006170

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000002078

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000012656

Gasterosteus aculeatus 76_1: ENSGACP00000015375

Gasterosteus aculeatus 76_1: ENSGACP00000015378

Gasterosteus aculeatus 76_1: ENSGACP00000019843

Takifugu rubripes 76_4: ENSTRUP00000038612

Takifugu rubripes 76_4: ENSTRUP00000038613

Takifugu rubripes 76_4: ENSTRUP00000043838

Tetraodon nigroviridis 76_8: ENSTNIP00000010896

Gadus morhua 76_1: ENSGMOP00000006052

Gadus morhua 76_1: ENSGMOP00000015362

Lepisosteus oculatus 76: ENSLOCP00000015972

Latimeria chalumnae 76_1: ENSLACP00000015550

Xenopus tropicalis 76_4.2: ENSXETP00000011134

Xenopus laevis : gi|123895423|sp|Q2NLB0|

Xenopus laevis : gi|148236382|ref|NP_001089931|

Xenopus laevis : gi|84570068|gb|AAI10759|

Xenopus laevis : gi|120577434|gb|AAI30088|

Anolis carolinensis 76_2.0: ENSACAP00000002805

Pelodiscus sinensis 76_1.0: ENSPSIP00000009053

Ficedula albicollis 76_1.0: ENSFALP00000002867

Gallus gallus 76_4: ENSGALP00000023567

Saccoglossus kowalevskii v3.0: Sakowv30011786m

Saccoglossus kowalevskii v3.0: Sakowv30011790m

Saccoglossus kowalevskii v3.0: Sakowv30011798m

Saccoglossus kowalevskii v3.0: Sakowv30011800m

Saccoglossus kowalevskii v3.0: Sakowv30011807m

Saccoglossus kowalevskii v3.0: Sakowv30011808m

Saccoglossus kowalevskii v3.0: Sakowv30011809m

Monodelphis domestica 76_5: ENSMODP00000021185

Sarcophilus harrisii 76_7.0: ENSSHAP00000014836

Choloepus hoffmanni 76_1: ENSCHOP00000007585

Choloepus hoffmanni 76_1: ENSCHOP00000009734

Dasypus novemcinctus 76_2: ENSDNOP00000000278

Dasypus novemcinctus 76_2: ENSDNOP00000028617

Echinops telfairi 76: ENSETEP00000008748

Loxodonta africana 76_3: ENSLAFP00000018693

Loxodonta africana 76_3: ENSLAFP00000012534

Procavia capensis 76_1: ENSPCAP00000014846

Erinaceus europaeus 76: ENSEEUP00000013357

Pteropus vampyrus 76_1: ENSPVAP00000009730

Myotis lucifugus 76_2.0: ENSMLUP00000009118

Equus caballus 76_2: ENSECAP00000009634

Felis catus 76_6.2: ENSFCAP00000011261

Canis familiaris 76_3.1: ENSCAFP00000024865

Ailuropoda melanoleuca 76_1: ENSAMEP00000000037

Tursiops truncatus 76_1: ENSTTRP00000012655

Vicugna pacos 76_1: ENSVPAP00000003148

Ovis aries 76_3.1: ENSOARP00000005331

Bos taurus 76_3.1: ENSBTAP00000000119

Sus scrofa 76_10.2: ENSSSCP00000006932

Oryctolagus cuniculus 76_2: ENSOCUP00000018313

Oryctolagus cuniculus 76_2: ENSOCUP00000008983

Cavia porcellus 76_3: ENSCPOP00000004383

Heterocephalus glaber v1.7-2: HGL_H00000357304

Ictidomys tridecemlineatus 76_2: ENSSTOP00000004259

Mus musculus 76_38: ENSMUSP00000029696

Rattus norvegicus 76_5.0: ENSRNOP00000027385

Otolemur garnettii 76_3: ENSOGAP00000002019

Callithrix jacchus 76_3.2.1: ENSCJAP00000014654

Callithrix jacchus 76_3.2.1: ENSCJAP00000014676

Callithrix jacchus 76_3.2.1: ENSCJAP00000014655

Macaca mulatta 76_1: ENSMMUP00000006185

Papio anubis 76: ENSPANP00000018261

Nomascus leucogenys 76_1.0: ENSNLEP00000014885

Pongo abelii 76_2: ENSPPYP00000000853

Pan troglodytes 76_2.1.4: ENSPTRP00000045551

Homo sapiens 76_38: ENSP00000357304

Homo sapiens 76_38: ENSP00000357303

Homo sapiens 76_38: ENSP00000357302