SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54928,_gap_,54928,54928,_gap_,57667 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD
57667 - beta-beta-alpha zinc fingers

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

35 sequences contain the _gap_,54928,_gap_,54928,54928,_gap_,57667 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Pelodiscus sinensis 76_1.0: ENSPSIP00000012677

Anas platyrhynchos 76_1.0: ENSAPLP00000002460

Dasypus novemcinctus 76_2: ENSDNOP00000001692

Echinops telfairi 76: ENSETEP00000010761

Loxodonta africana 76_3: ENSLAFP00000007149

Pteropus vampyrus 76_1: ENSPVAP00000007904

Myotis lucifugus 76_2.0: ENSMLUP00000010868

Equus caballus 76_2: ENSECAP00000022839

Felis catus 76_6.2: ENSFCAP00000004022

Canis familiaris 76_3.1: ENSCAFP00000013347

Ailuropoda melanoleuca 76_1: ENSAMEP00000016688

Mustela putorius furo 76_1.0: ENSMPUP00000007366

Tursiops truncatus 76_1: ENSTTRP00000013508

Vicugna pacos 76_1: ENSVPAP00000003823

Ovis aries 76_3.1: ENSOARP00000012205

Oryctolagus cuniculus 76_2: ENSOCUP00000008661

Cavia porcellus 76_3: ENSCPOP00000009071

Heterocephalus glaber v1.7-2: HGL_H00000377694

Ictidomys tridecemlineatus 76_2: ENSSTOP00000003609

Dipodomys ordii 76_1: ENSDORP00000006905

Mus musculus 76_38: ENSMUSP00000109466

Mus musculus 76_38: ENSMUSP00000032088

Mus musculus 76_38: ENSMUSP00000109467

Rattus norvegicus 76_5.0: ENSRNOP00000019617

Otolemur garnettii 76_3: ENSOGAP00000001030

Callithrix jacchus 76_3.2.1: ENSCJAP00000036116

Macaca mulatta 76_1: ENSMMUP00000009407

Papio anubis 76: ENSPANP00000007668

Nomascus leucogenys 76_1.0: ENSNLEP00000012554

Nomascus leucogenys 76_1.0: ENSNLEP00000024284

Tarsius syrichta 76_1: ENSTSYP00000011793

Gorilla gorilla 76_3.1: ENSGGOP00000012216

Pan troglodytes 76_2.1.4: ENSPTRP00000020674

Homo sapiens 76_38: ENSP00000264447

Homo sapiens 76_38: ENSP00000386433