SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,55486,49854,49854,57196,49854,57196,49854,49854,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55486 - Metalloproteases ("zincins"), catalytic domain
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain
57196 - EGF/Laminin
49854 - Spermadhesin, CUB domain
57196 - EGF/Laminin
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

24 sequences contain the _gap_,55486,49854,49854,57196,49854,57196,49854,49854,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Echinococcus granulosus : EgrG_000640700.1

Echinococcus multilocularis : EmuJ_000640700.1

Hymenolepis microstoma : HmN_000831700.1

Anopheles gambiae 49_3j: AGAP003702-PA

Culex pipiens quinquefasciatus : CPIJ011508|dorsal-ventral

Culex pipiens quinquefasciatus : CPIJ012475|ubiquitin-protein

Aedes aegypti 55: AAEL013239-PA

Aedes aegypti 55: AAEL001566-PA

Drosophila mojavensis 1.3: FBpp0173239

Drosophila virilis 1.2: FBpp0238068

Drosophila ananassae 1.3: FBpp0120416

Drosophila erecta 1.3: FBpp0129859

Drosophila melanogaster 76_5: FBpp0084068

Drosophila melanogaster 76_5: FBpp0084069

Drosophila simulans 1.3: FBpp0219526

Drosophila yakuba 1.3: FBpp0268519

Drosophila persimilis 1.3: FBpp0177728

Drosophila pseudoobscura 2.13: FBpp0282875

Drosophila willistoni 1.3: FBpp0243176

Drosophila grimshawi 1.3: FBpp0152351

Lucilia cuprina: KNC27951

Lucilia cuprina: KNC27950

Danaus plexippus OGS1.0: DPGLEAN21163-PA

Helobdella robusta : jgi|Helro1|191792