SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain combinations for _gap_,56371 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56371 - Ribosome inactivating proteins (RIP)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Domain combination graphics and links

150 sequences contain the _gap_,56371 domain architecture in all genomes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.

Streptomyces scabiei 87.22: gi|290954890|ref|YP_003486072.1|

Streptomyces coelicolor A3(2): gi|21225374|ref|NP_631153.1|

Sorghum bicolor : jgi|Sorbi1|5028481|Sb01g011660

Sorghum bicolor : jgi|Sorbi1|5030110|Sb01g039160

Sorghum bicolor : jgi|Sorbi1|5050752|Sb02g007220

Zea mays v181: GRMZM2G119705_T01|PACid:20834054

Zea mays v181: GRMZM2G047713_T01|PACid:20847706

Zea mays v181: GRMZM2G173809_T01|PACid:20841686

Zea mays v181: GRMZM2G100776_T01|PACid:20854825

Zea mays v181: GRMZM2G028179_T01|PACid:20848706

Zea mays subsp. mays : GRMZM2G119705_P01

Zea mays subsp. mays : GRMZM2G047713_P01

Zea mays subsp. mays : GRMZM2G173809_P01

Zea mays subsp. mays : GRMZM2G100776_P01

Setaria italica v164: Si038620m|PACid:19682183

Panicum virgatum v202: Pavirv00054216m|PACid:23761708

Panicum virgatum v202: Pavirv00064354m|PACid:23767785

Panicum virgatum v202: Pavirv00006071m|PACid:23788941

Panicum virgatum v202: Pavirv00049644m|PACid:23798560

Panicum virgatum v202: Pavirv00049654m|PACid:23816008

Panicum virgatum v202: Pavirv00022400m|PACid:23824422

Panicum virgatum v202: Pavirv00016524m|PACid:23761739

Panicum virgatum v202: Pavirv00025900m|PACid:23783997

Panicum virgatum v202: Pavirv00051946m|PACid:23792281

Phyllostachys heterocyclavar. pubescens: PH01001584G0250

Phyllostachys heterocyclavar. pubescens: PH01000471G0250

Oryza sativa v193: LOC_Os10g42060.1|PACid:21885771

Oryza sativa v193: LOC_Os03g47896.1|PACid:21912933

Oryza sativa v193: LOC_Os12g35010.1|PACid:21938594

Oryza sativa v193: LOC_Os03g48250.1|PACid:21915322

Oryza sativa v193: LOC_Os02g40340.1|PACid:21919491

Oryza sativa v193: LOC_Os02g40340.2|PACid:21919492

Oryza sativa v193: LOC_Os08g03900.1|PACid:21888017

Oryza sativa v193: LOC_Os10g24050.1|PACid:21885965

Oryza sativa v193: LOC_Os03g45120.1|PACid:21913333

Oryza sativa v193: LOC_Os03g47460.1|PACid:21917716

Oryza sativa v193: LOC_Os02g40400.1|PACid:21919381

Oryza sativa v193: LOC_Os11g38340.1|PACid:21947932

Oryza sativa v193: LOC_Os12g01290.1|PACid:21934332

Oryza sativa ssp. japonica 5.0: LOC_Os10g42060.1|13110.m03944|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g47896.1|13103.m05165|protein

Oryza sativa ssp. japonica 5.0: LOC_Os12g35010.1|13112.m03578|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g48250.1|13103.m05204|protein

Oryza sativa ssp. japonica 5.0: LOC_Os02g40340.1|13102.m04492|protein

Oryza sativa ssp. japonica 5.0: LOC_Os02g40340.2|13102.m04493|protein

Oryza sativa ssp. japonica 5.0: LOC_Os08g03900.1|13108.m00358|protein

Oryza sativa ssp. japonica 5.0: LOC_Os10g24050.1|13110.m02007|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g45120.1|13103.m04861|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g47460.1|13103.m05104|protein

Oryza sativa ssp. japonica 5.0: LOC_Os11g38340.1|13111.m03765|protein

Oryza sativa ssp. japonica 5.0: LOC_Os02g40400.1|13102.m04500|protein

Oryza sativa ssp. japonica 5.0: LOC_Os12g01290.1|13112.m00038|protein

Oryza brachyantha 22: OB01G14050.1

Oryza brachyantha 22: OB12G26870.1

Oryza brachyantha 22: OB09G12940.1

Oryza nivara 22: ONIVA11G09720.1

Oryza nivara 22: ONIVA11G09720.2

Oryza nivara 22: ONIVA10G07940.1

Oryza nivara 22: ONIVA10G21720.1

Oryza nivara 22: ONIVA03G28920.1

Oryza nivara 22: ONIVA02G04950.1

Oryza nivara 22: ONIVA01G41610.1

Oryza nivara 22: ONIVA12G00080.1

Oryza nivara 22: ONIVA03G30740.1

Oryza nivara 22: ONIVA08G07480.1

Oryza nivara 22: ONIVA12G15750.1

Oryza nivara 22: ONIVA03G31380.1

Oryza nivara 22: ONIVA08G13130.1

Oryza nivara 22: ONIVA08G13130.2

Oryza punctata 22: OPUNC01G03660.1

Oryza punctata 22: OPUNC08G01960.1

Oryza punctata 22: OPUNC03G26950.1

Oryza punctata 22: OPUNC03G26950.2

Oryza punctata 22: OPUNC03G27120.1

Oryza punctata 22: OPUNC02G22070.1

Oryza glaberrima: ORGLA10G0143400.1

Oryza glaberrima: ORGLA10G0070000.1

Oryza glaberrima: ORGLA03G0285600.1

Oryza glaberrima: ORGLA01G0400500.1

Oryza glaberrima: ORGLA03G0275000.1

Oryza glaberrima: ORGLA03G0258000.1

Oryza glumaepatula 22: OGLUM09G01470.1

Oryza glumaepatula 22: OGLUM08G02140.1

Oryza glumaepatula 22: OGLUM08G24710.1

Oryza glumaepatula 22: OGLUM07G05280.1

Oryza glumaepatula 22: OGLUM03G28590.1

Oryza glumaepatula 22: OGLUM03G30060.1

Oryza glumaepatula 22: OGLUM03G02070.2

Oryza glumaepatula 22: OGLUM02G24510.1

Oryza glumaepatula 22: OGLUM02G24510.2

Oryza glumaepatula 22: OGLUM02G24520.1

Oryza glumaepatula 22: OGLUM03G30340.1

Oryza meridionalis 22: OMERI11G15540.1

Oryza meridionalis 22: OMERI10G05370.1

Oryza meridionalis 22: OMERI09G01520.1

Oryza meridionalis 22: OMERI07G03800.1

Oryza meridionalis 22: OMERI05G21770.2

Oryza meridionalis 22: OMERI04G25580.1

Oryza meridionalis 22: OMERI03G25610.1

Oryza meridionalis 22: OMERI07G21110.1

Oryza meridionalis 22: OMERI07G21110.2

Oryza meridionalis 22: OMERI07G21110.3

Oryza meridionalis 22: OMERI07G21110.4

Oryza meridionalis 22: OMERI03G24980.1

Oryza meridionalis 22: OMERI02G22800.1

Oryza barthii 22: OBART03G29780.1

Oryza barthii 22: OBART11G17110.2

Oryza barthii 22: OBART11G17110.4

Oryza barthii 22: OBART11G17110.5

Oryza barthii 22: OBART10G08320.1

Oryza barthii 22: OBART10G19170.1

Oryza barthii 22: OBART08G02100.1

Oryza barthii 22: OBART04G30570.1

Oryza barthii 22: OBART03G27960.1

Oryza barthii 22: OBART02G03800.1

Oryza barthii 22: OBART02G08010.1

Oryza barthii 22: OBART11G18870.1

Oryza barthii 22: OBART08G02570.1

Oryza barthii 22: OBART03G02080.1

Brachypodium distachyon : EG:BRADI5G27420.1

Brachypodium distachyon : EG:BRADI1G37640.1

Aegilops tauschii 22: EMT07176

Aegilops tauschii 22: EMT10679

Aegilops tauschii 22: EMT23081

Aegilops tauschii 22: EMT24801

Aegilops tauschii 22: EMT33141

Aegilops tauschii 22: EMT16687

Aegilops tauschii 22: EMT01899

Aegilops tauschii 22: EMT03770

Aegilops tauschii 22: EMT22689

Aegilops tauschii 22: EMT24709

Aegilops tauschii 22: EMT30383

Aegilops tauschii 22: EMT30051

Aegilops tauschii 22: EMT30095

Triticum aestivum 22: Traes_1AL_A5860C535.1

Triticum aestivum 22: Traes_5DS_2873CCD2F.1

Triticum aestivum 22: Traes_2DS_9E49458AD.1

Triticum aestivum 22: Traes_6BS_F87437638.3

Triticum urartu 22: TRIUR3_23394-P1

Triticum urartu 22: TRIUR3_34730-P1

Triticum urartu 22: TRIUR3_05035-P1

Triticum urartu 22: TRIUR3_30110-P1

Triticum urartu 22: TRIUR3_14205-P1

Triticum urartu 22: TRIUR3_35370-P1

Triticum urartu 22: TRIUR3_28533-P1

Triticum urartu 22: TRIUR3_14457-P1

Triticum urartu 22: TRIUR3_17043-P1

Triticum urartu 22: TRIUR3_20635-P1

Triticum urartu 22: TRIUR3_06533-P1

Prunus persica v139: ppa009409m|PACid:17659008