SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57850,48452,57850,_gap_,88697,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57850 - RING/U-box
48452 - TPR-like
57850 - RING/U-box
88697 - PUA domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

19 sequences contain the _gap_,57850,48452,57850,_gap_,88697,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Amphimedon queenslandica: Aqu1.217061|PACid:15715589

Acropora digitifera v1.0: adi_v1.23187

Acropora digitifera v1.0: adi_v1.00929

Pediculus humanus corporis : vb|PHUM426280-PA|EEB16543.1|conserved

Drosophila mojavensis 1.3: FBpp0161411

Drosophila virilis 1.2: FBpp0225843

Drosophila ananassae 1.3: FBpp0127343

Drosophila erecta 1.3: FBpp0133482

Drosophila melanogaster 76_5: FBpp0076498

Drosophila melanogaster 76_5: FBpp0293529

Drosophila yakuba 1.3: FBpp0265397

Drosophila pseudoobscura 2.13: FBpp0286712

Drosophila willistoni 1.3: FBpp0239741

Adineta vaga: GSADVT00004351001

Oryzias latipes 76_1: ENSORLP00000011655

Oryzias latipes 76_1: ENSORLP00000011658

Gasterosteus aculeatus 76_1: ENSGACP00000024768

Tetraodon nigroviridis 76_8: ENSTNIP00000018765

Latimeria chalumnae 76_1: ENSLACP00000004020