SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,82895,_gap_,82895,82895,82895,82895,82895,82895,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

69 sequences contain the _gap_,82895,_gap_,82895,82895,82895,82895,82895,82895,_gap_ domain architecture in all genomes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Phytophthora sojae 1.1: jgi|Physo1_1|140285|estExt_fgenesh1_pg.C_840012

Pythium ultimum v1.7-2: PYU1_T006493

Hydra vulgaris: gi|221112850|ref|XP_002157812.1|

Daphnia pulex : jgi|Dappu1|314628|NCBI_GNO_1200052

Drosophila ananassae 1.3: FBpp0119632

Drosophila erecta 1.3: FBpp0130614

Drosophila melanogaster 76_5: FBpp0291051

Drosophila melanogaster 76_5: FBpp0291052

Drosophila melanogaster 76_5: FBpp0289566

Drosophila melanogaster 76_5: FBpp0291053

Drosophila sechellia 1.3: FBpp0197769

Drosophila simulans 1.3: FBpp0216434

Drosophila yakuba 1.3: FBpp0255522

Drosophila willistoni 1.3: FBpp0240142

Lucilia cuprina: KNC25205

Atta cephalotes v1.1: AC10732-PA

Acromyrmex echinatior v3.8: Aech_14453

Harpegnathos saltator v3.3: Hsal_08218--XP_392121.2_APIME

Nasonia vitripennis : gi|156551686|ref|XP_001601735.1|

Oikopleura dioica: GSOIDT00015702001

Oikopleura dioica: GSOIDT00016959001

Danio rerio 76_9: ENSDARP00000101376

Oreochromis niloticus 76_1.0: ENSONIP00000003624

Poecilia formosa 76: ENSPFOP00000014393

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000016628

Oryzias latipes 76_1: ENSORLP00000017867

Gasterosteus aculeatus 76_1: ENSGACP00000019291

Lepisosteus oculatus 76: ENSLOCP00000017940

Lepisosteus oculatus 76: ENSLOCP00000017945

Latimeria chalumnae 76_1: ENSLACP00000009386

Ficedula albicollis 76_1.0: ENSFALP00000001634

Taeniopygia guttata 76_3.2.4: ENSTGUP00000006004

Gallus gallus 76_4: ENSGALP00000004660

Gallus gallus 76_4: ENSGALP00000006411

Gallus gallus 76_4: ENSGALP00000006491

Meleagris gallopavo 76_2: ENSMGAP00000006674

Saccoglossus kowalevskii v3.0: Sakowv30016230m

Echinops telfairi 76: ENSETEP00000009735

Loxodonta africana 76_3: ENSLAFP00000013983

Loxodonta africana 76_3: ENSLAFP00000027933

Pteropus vampyrus 76_1: ENSPVAP00000004966

Pteropus vampyrus 76_1: ENSPVAP00000002502

Myotis lucifugus 76_2.0: ENSMLUP00000003163

Equus caballus 76_2: ENSECAP00000009905

Felis catus 76_6.2: ENSFCAP00000015628

Canis familiaris 76_3.1: ENSCAFP00000029273

Mustela putorius furo 76_1.0: ENSMPUP00000004654

Tursiops truncatus 76_1: ENSTTRP00000008906

Ovis aries 76_3.1: ENSOARP00000022383

Bos taurus 76_3.1: ENSBTAP00000004686

Sus scrofa 76_10.2: ENSSSCP00000021587

Ochotona princeps 76: ENSOPRP00000001742

Oryctolagus cuniculus 76_2: ENSOCUP00000000800

Ictidomys tridecemlineatus 76_2: ENSSTOP00000020941

Mus musculus 76_38: ENSMUSP00000096257

Mus musculus 76_38: ENSMUSP00000131418

Mus musculus 76_38: ENSMUSP00000088774

Macaca mulatta 76_1: ENSMMUP00000022629

Macaca mulatta 76_1: ENSMMUP00000040113

Pongo abelii 76_2: ENSPPYP00000007492

Pongo abelii 76_2: ENSPPYP00000022137

Gorilla gorilla 76_3.1: ENSGGOP00000001430

Gorilla gorilla 76_3.1: ENSGGOP00000010854

Pan troglodytes 76_2.1.4: ENSPTRP00000038828

Pan troglodytes 76_2.1.4: ENSPTRP00000040565

Homo sapiens 76_38: ENSP00000347484

Homo sapiens 76_38: ENSP00000346478

Homo sapiens 76_38: ENSP00000376780

Homo sapiens 76_38: ENSP00000376781