SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,90188,82895,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

90188 - Somatomedin B domain
82895 - TSP-1 type 1 repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

42 sequences contain the _gap_,90188,82895,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Schistosoma mansoni : Smp_060030

Taenia solium : TsM_000334800;OldName=hunter_18241

Echinococcus granulosus : EgrG_000199900.1

Echinococcus multilocularis : EmuJ_000199900.1

Hymenolepis microstoma : HmN_000782400.1

Trichinella spiralis 22: EFV51060

Caenorhabditis briggsae 2: CBG18302

Caenorhabditis elegans 76_235: R17.3

Caenorhabditis remanei : CRE04627

Caenorhabditis brenneri : CBN31841

Brugia malayi WS250: Bm5396a

Brugia malayi WS250: Bm5396b

Brugia malayi WS250: Bm5396c

Onchocerca volvulus 22: OVOC8319

Pristionchus pacificus : PPA25529

Ixodes scapularis : ISCW003427-PA

Sarcoptes scabiei: SSCA009685-PA

Drosophila melanogaster 76_5: FBpp0289140

Lucilia cuprina: KNC26807

Camponotus floridanus v3.3: Cflo_08218--XP_001121838.1_APIME

Acromyrmex echinatior v3.8: Aech_04369

Nasonia vitripennis : gi|156555111|ref|XP_001604615.1|

Nasonia vitripennis : gi|156555115|ref|XP_001604663.1|

Capitella sp. I : jgi|Capca1|170824|estExt_Genewise1Plus.C_240087

Helobdella robusta : jgi|Helro1|63997

Helobdella robusta : jgi|Helro1|95115

Crassostrea gigas 22: EKC25703

Ciona intestinalis 76: ENSCINP00000011347

Oikopleura dioica: GSOIDT00008416001

Danio rerio 76_9: ENSDARP00000127811

Astyanax mexicanus 76: ENSAMXP00000016245

Astyanax mexicanus 76: ENSAMXP00000017294

Oryzias latipes 76_1: ENSORLP00000002815

Tetraodon nigroviridis 76_8: ENSTNIP00000018459

Gadus morhua 76_1: ENSGMOP00000012466

Latimeria chalumnae 76_1: ENSLACP00000006218

Anolis carolinensis 76_2.0: ENSACAP00000014175

Anolis carolinensis 76_2.0: ENSACAP00000021496

Monodelphis domestica 76_5: ENSMODP00000008860

Sarcophilus harrisii 76_7.0: ENSSHAP00000009331

Ovis aries 76_3.1: ENSOARP00000005906

Callithrix jacchus 76_3.2.1: ENSCJAP00000014274