SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56371,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56371 - Ribosome inactivating proteins (RIP)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

66 sequences contain the 56371,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Sorghum bicolor : jgi|Sorbi1|5047883|Sb01g004070

Zea mays v181: GRMZM2G035890_T01|PACid:20864850

Zea mays v181: GRMZM2G099502_T01|PACid:20848337

Zea mays subsp. mays : GRMZM2G035890_P01

Zea mays subsp. mays : GRMZM2G099502_P01

Setaria italica v164: Si027541m|PACid:19706282

Setaria italica v164: Si026717m|PACid:19708645

Panicum virgatum v202: Pavirv00006880m|PACid:23756542

Panicum virgatum v202: Pavirv00025075m|PACid:23757560

Panicum virgatum v202: Pavirv00022770m|PACid:23758550

Panicum virgatum v202: Pavirv00022771m|PACid:23758551

Panicum virgatum v202: Pavirv00054725m|PACid:23763292

Panicum virgatum v202: Pavirv00040079m|PACid:23770474

Panicum virgatum v202: Pavirv00006140m|PACid:23773625

Panicum virgatum v202: Pavirv00066996m|PACid:23785541

Panicum virgatum v202: Pavirv00057635m|PACid:23786509

Panicum virgatum v202: Pavirv00048529m|PACid:23795047

Panicum virgatum v202: Pavirv00066314m|PACid:23795578

Panicum virgatum v202: Pavirv00009451m|PACid:23798754

Panicum virgatum v202: Pavirv00035707m|PACid:23805149

Panicum virgatum v202: Pavirv00046299m|PACid:23811767

Panicum virgatum v202: Pavirv00065987m|PACid:23819128

Oryza sativa v193: LOC_Os11g06460.1|PACid:21948759

Oryza sativa v193: LOC_Os03g47310.1|PACid:21914067

Oryza sativa v193: LOC_Os12g07520.1|PACid:21937336

Oryza sativa v193: LOC_Os11g01290.1|PACid:21944386

Oryza sativa v193: LOC_Os11g06490.1|PACid:21948391

Oryza sativa v193: LOC_Os03g48235.1|PACid:21911239

Oryza sativa v193: LOC_Os03g47890.1|PACid:21917611

Oryza sativa ssp. japonica 5.0: LOC_Os11g06460.1|13111.m00653|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g47310.1|13103.m05092|protein

Oryza sativa ssp. japonica 5.0: LOC_Os12g07520.1|13112.m00787|protein

Oryza sativa ssp. japonica 5.0: LOC_Os11g01290.1|13111.m00037|protein

Oryza sativa ssp. japonica 5.0: LOC_Os11g06490.1|13111.m00656|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g47890.1|13103.m05164|protein

Oryza sativa ssp. japonica 5.0: LOC_Os03g48235.1|13103.m12829|protein

Oryza brachyantha 22: OB03G37230.1

Oryza nivara 22: ONIVA11G04190.1

Oryza punctata 22: OPUNC01G21430.1

Oryza punctata 22: OPUNC03G35410.1

Oryza punctata 22: OPUNC07G17300.1

Oryza punctata 22: OPUNC11G03810.1

Oryza glaberrima: ORGLA11G0003000.1

Oryza glaberrima: ORGLA03G0285500.1

Oryza glumaepatula 22: OGLUM11G03880.1

Oryza glumaepatula 22: OGLUM11G03910.1

Oryza glumaepatula 22: OGLUM11G05810.1

Oryza meridionalis 22: OMERI11G00260.1

Oryza meridionalis 22: OMERI11G00460.1

Oryza barthii 22: OBART11G00200.1

Oryza barthii 22: OBART11G04170.1

Oryza barthii 22: OBART07G18370.1

Oryza barthii 22: OBART03G29440.1

Triticum aestivum 22: Traes_7AS_7D9AE6E09.1

Triticum urartu 22: TRIUR3_21699-P1

Triticum urartu 22: TRIUR3_31902-P1

Populus trichocarpa v156: POPTR_0017s04370.1|PACid:18210110

Populus trichocarpa v156: POPTR_0017s00610.1|PACid:18210350

Theobroma cacao B97-61/B2 v1: Tc07_g003890

Theobroma cacao B97-61/B2 v1: Tc07_g005820

Theobroma cacao B97-61/B2 v1: Tc07_g005860

Magnaporthe poae ATCC 64411 22: MAPG_11083T0

Daldinia eschscholzii EC12 v1.0: jgi|DalEC12_1|21401|gm1.4009_g

Culex pipiens quinquefasciatus : CPIJ009211|conserved

Aedes aegypti 55: AAEL008050-PA

Aedes aegypti 55: AAEL005004-PA