SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,55785,55781,55785,47384,55874 superfamilies in all Archaeal genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

4 sequences contain the _gap_,55785,55781,55785,47384,55874 domain architecture in Archaea.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Halobacterium salinarum R1: gi|169235768|ref|YP_001688968.1|

Methanohalophilus mahii DSM 5219: gi|294495111|ref|YP_003541604.1|

Methanohalophilus mahii DSM 5219: gi|294496045|ref|YP_003542538.1|

Halobacterium sp. NRC-1: gi|15790044|ref|NP_279868.1|