SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 55486,89260 superfamilies in all Bacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55486 - Metalloproteases ("zincins"), catalytic domain
89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

21 sequences contain the 55486,89260 domain architecture in Bacteria.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Rhodanobacter denitrificans: gi|469817248|ref|YP_007589332.1|

Shewanella violacea DSS12: gi|294142087|ref|YP_003558065.1|

Vibrio cholerae O395: gi|147671703|ref|YP_001215212.1|

Vibrio vulnificus MO6-24/O: gi|320159214|ref|YP_004191592.1|

Vibrio furnissii NCTC 11218: gi|375132665|ref|YP_005049073.1|

Vibrio anguillarum 775: gi|336125782|ref|YP_004577738.1|

Vibrio splendidus LGP32: gi|218709260|ref|YP_002416881.1|

Vibrio sp. Ex25: gi|262395574|ref|YP_003287427.1|

Leptothrix cholodnii SP-6: gi|171060980|ref|YP_001793329.1|

Thauera sp. MZ1T: gi|237653640|ref|YP_002889954.1|

Pirellula staleyi DSM 6068: gi|283778364|ref|YP_003369119.1|

Chitinophaga pinensis DSM 2588: gi|256421228|ref|YP_003121881.1|

Niastella koreensis GR20-10: gi|375148735|ref|YP_005011176.1|

Niastella koreensis GR20-10: gi|375144117|ref|YP_005006558.1|

Niastella koreensis GR20-10: gi|375147838|ref|YP_005010279.1|

Chloroflexus aurantiacus J-10-fl: gi|163848803|ref|YP_001636847.1|

Chloroflexus sp. Y-400-fl: gi|222526756|ref|YP_002571227.1|

Caldilinea aerophila DSM 14535 = NBRC 104270: gi|383764620|ref|YP_005443602.1|

Intrasporangium calvum DSM 43043: gi|317126174|ref|YP_004100286.1|

Streptosporangium roseum DSM 43021: gi|271967090|ref|YP_003341286.1|

Microcystis aeruginosa NIES-843: gi|166367965|ref|YP_001660238.1|