SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 89260,_gap_ superfamilies in all Bacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

121 sequences contain the 89260,_gap_ domain architecture in Bacteria.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Aciduliprofundum boonei T469: gi|289596436|ref|YP_003483132.1|

Methanosarcina barkeri str. Fusaro: gi|73669089|ref|YP_305104.1|

Methanosarcina acetivorans C2A: gi|20092439|ref|NP_618514.1|

Methanosaeta harundinacea 6Ac: gi|386001425|ref|YP_005919724.1|

Pseudomonas fluorescens SBW25: gi|229591431|ref|YP_002873550.1|

Pseudomonas sp. TKP: gi|568141172|ref|YP_008933757.1|

Dickeya zeae Ech1591: gi|251787856|ref|YP_003002577.1|

Nitrosococcus oceani ATCC 19707: gi|77163767|ref|YP_342292.1|

Nitrosococcus halophilus Nc4: gi|292493866|ref|YP_003529305.1|

Nitrosococcus watsonii C-113: gi|300113046|ref|YP_003759621.1|

Allochromatium vinosum DSM 180: gi|288942766|ref|YP_003445006.1|

Methylomonas methanica MC09: gi|333983620|ref|YP_004512830.1|

Kangiella koreensis DSM 16069: gi|256822986|ref|YP_003146949.1|

Kangiella koreensis DSM 16069: gi|256823471|ref|YP_003147434.1|

Colwellia psychrerythraea 34H: gi|71279752|ref|YP_267137.1|

Shewanella denitrificans OS217: gi|91794439|ref|YP_564090.1|

Vibrio sp. Ex25: gi|262395574|ref|YP_003287427.1|

Azospirillum brasilense Sp245: gi|392378668|ref|YP_004985828.1|

Azospirillum brasilense Sp245: gi|392380738|ref|YP_005029934.1|

Azospirillum brasilense Sp245: gi|392378508|ref|YP_004985668.1|

Azospirillum sp. B510: gi|288962285|ref|YP_003452580.1|

Azospirillum lipoferum 4B: gi|374294201|ref|YP_005041226.1|

Azospirillum lipoferum 4B: gi|375006529|ref|YP_004975313.1|

Rubrivivax gelatinosus IL144: gi|383756355|ref|YP_005435340.1|

Sorangium cellulosum 'So ce 56': gi|162457542|ref|YP_001619909.1|

Haliangium ochraceum DSM 14365: gi|262197152|ref|YP_003268361.1|

Desulfobacterium autotrophicum HRM2: gi|224371609|ref|YP_002605773.1|

Desulfatibacillum alkenivorans AK-01: gi|218779971|ref|YP_002431289.1|

Candidatus Solibacter usitatus Ellin6076: gi|116624787|ref|YP_826943.1|

Candidatus Solibacter usitatus Ellin6076: gi|116622862|ref|YP_825018.1|

Candidatus Solibacter usitatus Ellin6076: gi|116624586|ref|YP_826742.1|

Treponema azotonutricium ZAS-9: gi|333993227|ref|YP_004525840.1|

Brachyspira hyodysenteriae WA1: gi|225619879|ref|YP_002721136.1|

Brachyspira pilosicoli 95/1000: gi|300870047|ref|YP_003784918.1|

Brachyspira intermedia PWS/A: gi|384208399|ref|YP_005594119.1|

Brachyspira intermedia PWS/A: gi|384207643|ref|YP_005593363.1|

Brachyspira murdochii DSM 12563: gi|296125686|ref|YP_003632938.1|

Brachyspira murdochii DSM 12563: gi|296126444|ref|YP_003633696.1|

Pirellula staleyi DSM 6068: gi|283779870|ref|YP_003370625.1|

Pirellula staleyi DSM 6068: gi|283778364|ref|YP_003369119.1|

Rhodopirellula baltica SH 1: gi|32475979|ref|NP_868973.1|

Rhodopirellula baltica SH 1: gi|32477673|ref|NP_870667.1|

Planctomyces limnophilus DSM 3776: gi|296121704|ref|YP_003629482.1|

Planctomyces brasiliensis DSM 5305: gi|325109880|ref|YP_004270948.1|

Isosphaera pallida ATCC 43644: gi|320104437|ref|YP_004180028.1|

Flavobacterium psychrophilum JIP02/86: gi|150025779|ref|YP_001296605.1|

Riemerella anatipestifer ATCC 11845 = DSM 15868: gi|313206430|ref|YP_004045607.1|

Chitinophaga pinensis DSM 2588: gi|256423202|ref|YP_003123855.1|

Niastella koreensis GR20-10: gi|375145791|ref|YP_005008232.1|

Niastella koreensis GR20-10: gi|375148735|ref|YP_005011176.1|

Haliscomenobacter hydrossis DSM 1100: gi|332666376|ref|YP_004449164.1|

Chlorobium chlorochromatii CaD3: gi|78188993|ref|YP_379331.1|

Bacillus megaterium DSM 319: gi|295705352|ref|YP_003598427.1|

Bacillus megaterium DSM 319: gi|295702484|ref|YP_003595559.1|

Bacillus halodurans C-125: gi|15613861|ref|NP_242164.1|

Bacillus licheniformis DSM 13 = ATCC 14580: gi|404487628|ref|YP_006711734.1|

Halobacillus halophilus DSM 2266: gi|386715732|ref|YP_006182056.1|

Geobacillus sp. WCH70: gi|239828386|ref|YP_002951010.1|

Paenibacillus polymyxa M1: gi|507716448|ref|YP_008049057.1|

Paenibacillus mucilaginosus 3016: gi|379718073|ref|YP_005310204.1|

Paenibacillus terrae HPL-003: gi|374324988|ref|YP_005078117.1|

Paenibacillus terrae HPL-003: gi|374324987|ref|YP_005078116.1|

Paenibacillus sp. JDR-2: gi|251799763|ref|YP_003014494.1|

Brevibacillus brevis NBRC 100599: gi|226314991|ref|YP_002774887.1|

Exiguobacterium sibiricum 255-15: gi|172058761|ref|YP_001815221.1|

Exiguobacterium sp. AT1b: gi|229916826|ref|YP_002885472.1|

Exiguobacterium sp. AT1b: gi|229916828|ref|YP_002885474.1|

Exiguobacterium sp. MH3: gi|557830039|ref|YP_008802066.1|

Streptococcus agalactiae A909: gi|76788705|ref|YP_329906.1|

Lactobacillus acidophilus 30SC: gi|325955901|ref|YP_004286511.1|

Lactobacillus helveticus DPC 4571: gi|161506789|ref|YP_001576743.1|

Lactobacillus amylovorus GRL1118: gi|385816798|ref|YP_005853188.1|

Lactobacillus amylovorus GRL1118: gi|385817603|ref|YP_005853993.1|

Lactobacillus crispatus ST1: gi|295692057|ref|YP_003600667.1|

Caldicellulosiruptor kristjanssonii 177R1B: gi|312793135|ref|YP_004026058.1|

Caldicellulosiruptor kronotskyensis 2002: gi|312622820|ref|YP_004024433.1|

Mahella australiensis 50-1 BON: gi|332982187|ref|YP_004463628.1|

Clostridium cellulovorans 743B: gi|302873807|ref|YP_003842440.1|

Clostridium cellulovorans 743B: gi|302876061|ref|YP_003844694.1|

Roseburia intestinalis: gi|479202053|ref|YP_007830644.1|

Roseburia intestinalis: gi|479202210|ref|YP_007830801.1|

Roseburia hominis A2-183: gi|347533526|ref|YP_004840289.1|

Eubacterium rectale M104/1: gi|479216239|ref|YP_007843621.1|

[Ruminococcus] obeum: gi|479177886|ref|YP_007805487.1|

Thermincola potens JR: gi|296133819|ref|YP_003641066.1|

Chloroflexus aurantiacus J-10-fl: gi|163846971|ref|YP_001635015.1|

Chloroflexus aurantiacus J-10-fl: gi|163848803|ref|YP_001636847.1|

Chloroflexus aggregans DSM 9485: gi|219848673|ref|YP_002463106.1|

Chloroflexus sp. Y-400-fl: gi|222524792|ref|YP_002569263.1|

Chloroflexus sp. Y-400-fl: gi|222526756|ref|YP_002571227.1|

Chloroflexus sp. MS-G: WP_031458268.1

Herpetosiphon aurantiacus DSM 785: gi|159896578|ref|YP_001542825.1|

Herpetosiphon aurantiacus DSM 785: gi|159896877|ref|YP_001543124.1|

Anaerolinea thermophila UNI-1: gi|320162444|ref|YP_004175669.1|

Caldilinea aerophila DSM 14535 = NBRC 104270: gi|383763588|ref|YP_005442570.1|

Kribbella flavida DSM 17836: gi|284032192|ref|YP_003382123.1|

Anabaena sp. 90: gi|414078930|ref|YP_006998248.1|

Anabaena sp. 90: gi|414078134|ref|YP_006997452.1|

Anabaena sp. 90: gi|414078543|ref|YP_006997861.1|

Nostoc sp. PCC 7120: gi|17231307|ref|NP_487855.1|

Nostoc sp. PCC 7120: gi|17227865|ref|NP_484413.1|

Nostoc sp. PCC 7120: gi|17228579|ref|NP_485127.1|

Anabaena variabilis ATCC 29413: gi|75908107|ref|YP_322403.1|

Rivularia sp. PCC 7116: gi|427738429|ref|YP_007057973.1|

Rivularia sp. PCC 7116: gi|427734485|ref|YP_007054029.1|

Rivularia sp. PCC 7116: gi|427734486|ref|YP_007054030.1|

Microcystis aeruginosa NIES-843: gi|166367424|ref|YP_001659697.1|

Halothece sp. PCC 7418: gi|428776650|ref|YP_007168437.1|

Gloeocapsa sp. PCC 7428: gi|434395093|ref|YP_007130040.1|

Trichodesmium erythraeum IMS101: gi|113474615|ref|YP_720676.1|

Trichodesmium erythraeum IMS101: gi|113475163|ref|YP_721224.1|

Trichodesmium erythraeum IMS101: gi|113475561|ref|YP_721622.1|

Trichodesmium erythraeum IMS101: gi|113475637|ref|YP_721698.1|

Trichodesmium erythraeum IMS101: gi|113476402|ref|YP_722463.1|

Trichodesmium erythraeum IMS101: gi|113476963|ref|YP_723024.1|

Trichodesmium erythraeum IMS101: gi|113477960|ref|YP_724021.1|

Microcoleus sp. PCC 7113: gi|428312682|ref|YP_007123659.1|

Microcoleus sp. PCC 7113: gi|428311945|ref|YP_007122922.1|

Microcoleus sp. PCC 7113: gi|428313629|ref|YP_007124606.1|

Pseudanabaena sp. PCC 7367: gi|428217007|ref|YP_007101472.1|

Leptolyngbya sp. PCC 7376: gi|427725489|ref|YP_007072766.1|