SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 89260,_gap_ superfamilies in all Bacterial genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

14 sequences contain the 89260,_gap_ domain architecture in Bacteria.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Methylomonas methanica MC09: gi|333983620|ref|YP_004512830.1|

Colwellia psychrerythraea 34H: gi|71279752|ref|YP_267137.1|

Azospirillum brasilense Sp245: gi|392380738|ref|YP_005029934.1|

Azospirillum brasilense Sp245: gi|392378508|ref|YP_004985668.1|

Azospirillum lipoferum 4B: gi|375006529|ref|YP_004975313.1|

Haliangium ochraceum DSM 14365: gi|262197152|ref|YP_003268361.1|

Brachyspira intermedia PWS/A: gi|384207643|ref|YP_005593363.1|

Brachyspira murdochii DSM 12563: gi|296126444|ref|YP_003633696.1|

Bacillus halodurans C-125: gi|15613861|ref|NP_242164.1|

Bacillus licheniformis DSM 13 = ATCC 14580: gi|404487628|ref|YP_006711734.1|

Caldicellulosiruptor kristjanssonii 177R1B: gi|312793135|ref|YP_004026058.1|

Caldicellulosiruptor kronotskyensis 2002: gi|312622820|ref|YP_004024433.1|

[Ruminococcus] obeum: gi|479177886|ref|YP_007805487.1|

Trichodesmium erythraeum IMS101: gi|113474615|ref|YP_720676.1|